KEGG   Psychrobacter sp. G: PSYCG_04770
Entry
PSYCG_04770       CDS       T02715                                 
Name
(GenBank) RNaseH ribonuclease
  KO
K14159  ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7]
Organism
pso  Psychrobacter sp. G
Pathway
pso03030  DNA replication
pso03430  Mismatch repair
pso03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pso00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PSYCG_04770
   03430 Mismatch repair
    PSYCG_04770
   03440 Homologous recombination
    PSYCG_04770
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pso03032]
    PSYCG_04770
   03400 DNA repair and recombination proteins [BR:pso03400]
    PSYCG_04770
Enzymes [BR:pso01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     PSYCG_04770
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.4  ribonuclease H
     PSYCG_04770
DNA replication proteins [BR:pso03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     PSYCG_04770
    RNase H
     PSYCG_04770
DNA repair and recombination proteins [BR:pso03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     PSYCG_04770
SSDB
Motif
Pfam: RNase_H RNase_T Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: AGP47579
LinkDB
Position
complement(1049676..1051274)
AA seq 532 aa
MSENRSAAQPFNTSNAINPLAAKADTTVAYTDGACKGNPGAGGWGAHLIFSDGRTQDFYG
GDKETTNNRMELMGAIQALTHSSHEQKLEIWTDSSYVKKGITEWIEGWKKRGWKTASKKP
VANQDLWQRLDELCQKRDVDWHWVKGHAGNAGNEKSDELANLGVTSRSEDLITDIQDSTK
KKEPIMADKKPSSSDDWLNFDPLGFDMMDDELDAELLENQSYNDSVINTHAFAEENISPY
NATNSMSAIEMPDAQTPLIDTSINNHASNMVTNVEADTPKFDGDTSRANPYFIPLLPKPI
HRHESDRQLIMDTETTGLDPLKGDRIIEVGIVEMIGRKFTGEKLHVYINPQRGMDEEVIR
IHGISEAFLTDKPTFDQVAQSLYDFMDGAEVIAHNASFDMNFLNMEFAKVGMHDFAERVK
VTDSLVMAKQQYPGQKNTLDALVRRLDVGKQDRTFHGALLDSEILAEVYLAMTGGQVTLG
IEDDAQADGGHTAHASFANLAALLLESSTDEGANQSWYASLAEDYPELKAKM
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtcagaaaatcgcagcgcagcgcagccatttaacaccagtaatgccataaacccattg
gctgccaaagcagatactacggttgcttacacagatggcgcgtgtaaaggcaatcctggt
gctggtggctggggcgctcatctgatatttagcgacggacggacgcaggatttttatggc
ggtgataaagaaacaaccaataatcgtatggaattgatgggtgcgatacaagcattaacc
catagctcgcatgagcagaaactcgagatttggacagactcaagttatgtcaaaaaaggc
atcactgagtggattgaaggttggaaaaaaagaggctggaaaacggccagtaaaaaaccc
gtcgccaatcaagacctatggcagcgactcgatgagctctgtcagaaacgcgatgttgat
tggcattgggtaaaaggtcatgctggtaatgctggtaatgaaaaatcggatgagcttgca
aacctaggtgtgacctcacgtagtgaagatttgataacagacattcaagatagtactaaa
aaaaaagagccaataatggctgataaaaagccatcaagcagcgatgattggctaaatttt
gatccattaggttttgatatgatggatgatgagcttgatgccgaactactagagaatcaa
agttataatgacagtgtaataaatactcatgctttcgctgaagaaaatattagtccgtac
aatgccaccaattcaatgagtgctatagaaatgccagacgcccagacgcctttgattgat
acaagcatcaataaccatgcgtccaacatggttactaatgttgaagcagatacgccaaaa
ttcgatggtgataccagccgtgccaatccgtattttataccgctgctacccaagccaatc
catcgtcatgaatcagatcgtcagctcattatggatactgagaccaccggtcttgatccg
ctaaaaggcgatcgcattatcgaagtcggtattgtagagatgatcggacgtaagttcacc
ggcgaaaagctccacgtctatatcaacccacagcgcggtatggatgaagaagttattcga
attcacggtatttctgaagcgtttttaacggacaaaccaacctttgaccaagtcgcgcag
tcgctctatgactttatggatggtgcagaagtcatcgctcataatgcctcgtttgatatg
aacttcttaaatatggagtttgccaaagttggcatgcatgactttgctgagcgagtaaaa
gtgaccgactcactggtcatggcaaagcagcagtatcctggacagaaaaatactcttgat
gctctcgtacgtcgtttagacgtgggcaagcaagaccgtacctttcacggggcattacta
gattcagagattttagcagaagtctatttggcgatgactggcggacaagtaacgctaggc
attgaggatgacgcgcaagcggatggcggacacacagcccatgctagctttgccaattta
gcggctttattgcttgagtcaagtactgatgagggcgccaatcaaagctggtatgcgtcg
ctcgcagaagattatcctgagctgaaagccaaaatgtaa

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