Psychrobacter sp. G: PSYCG_05330
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Entry
PSYCG_05330 CDS
T02715
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pso
Psychrobacter sp. G
Pathway
pso03420
Nucleotide excision repair
pso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PSYCG_05330
03430 Mismatch repair
PSYCG_05330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_05330
Enzymes [BR:
pso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PSYCG_05330
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PSYCG_05330
MMR (mismatch excision repair)
Other MMR factors
PSYCG_05330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
DEAD
GpA_ATPase
Motif
Other DBs
NCBI-ProteinID:
AGP48591
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All DBs
Position
1183468..1185669
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AA seq
733 aa
AA seq
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MTTTIFATHHYNYPQNFIEMKPKIARLEQAIKKLEANLINADAEVLAQRLSNHLGLQVDY
ASELNANQLLAATTIEGKVLVIAGAGSGKTKTLTYRTSYLIENGVSPKEILLLTFTRKAA
NEIKGRAKKLLASTPSFAQRLNEDLVEDKLPKNKALNDITSGTFHSFCNMLLRQYSGLLG
INPRFTILDTGDSEDAIDLIHKEKKYPTKITNQAFPRKKTLQNIFSTSRNRRIHIRDLIE
NSYPDIAVHIPVIEQLAIDFHEYKRVNHLYDFDDIISQVVRHLKTNDTFRQLLQKQYRYV
MVDEYQDTNIPQKELIDLICAPTSVSLMVVGDDNQSIYAFRGANYENILLFGEGYPEAKL
IKLEQNYRSTPAVLDYINALSAQITLGYQKQLYSGVSIEGVKPIFRRLSDESKEAKYIAD
RIIELKPDYDYQDFAVLCRTSFQSNYVQLEFMERNIPFIVVGGIRFIERRHIKDVLAFVK
ILYNPNDTIAWHRILTLFKGVGSVTATRLTQAINADNNSFEPLLTTKFAKKSTQLEPLYK
MLSQASQAESVEAIIELILDFYMPVLKINEDNWRERSEDFRVLKNLALEHDSLDKFLENL
ALDPPNDSVATEGEPEKGEEGIDKNRDKVTISTIHSAKGLEWPVVFVNSLVDGMTPHHRS
LSDFEELEEERKLFYVACSRAKSRLFLTAPDYFSSYSGYFDKVSRFIAEVPADKITVLTV
KQPLEESDDPVWW
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccatttttgctacccaccattataattatccgcaaaattttatcgagatg
aaacccaagattgcgcggcttgaacaggcaattaagaagcttgaagccaatctgataaat
gcggatgctgaggtattagcgcaaaggcttagcaatcatttagggttgcaagtagattat
gccagtgagcttaatgccaatcagctattggccgccacgactattgagggcaaggtattg
gtgatcgccggtgccggttctggtaaaaccaagactttgacctatagaaccagttacttg
atagaaaatggcgtgtcgccaaaagagattttactattaacctttactcgtaaagcagcc
aacgaaatcaaaggtcgggctaaaaaattgctggcaagcacaccatcttttgcccaaagg
ttaaatgaggatttggtagaagataaattgccaaaaaataaagccctgaatgacattacc
agtggcactttccattctttttgtaatatgctcttgcgtcaatactcaggtctgcttggt
attaatccaagatttaccattctagatacaggcgacagtgaagacgctatcgatttaatt
cataaggaaaaaaagtatccgaccaaaataaccaatcaggcatttccgcgcaaaaaaacc
ttgcaaaatatcttctcaacctctagaaatcggcgcattcatatccgcgatttaatcgaa
aacagctatcctgatattgctgtacatattcctgttattgagcaattggccattgacttt
catgagtacaagcgtgtcaatcatttatacgattttgatgacatcattagccaagtggtg
cgtcatttaaagactaatgacacctttcgccaactgctacaaaagcaatatcgttatgtc
atggtcgatgaatatcaagacaccaatattccgcaaaaagagctgattgatctcatctgt
gcgcctacgtcagtgtcgctgatggtcgtcggtgatgacaaccaaagtatttatgccttt
cgcggcgccaattatgaaaatatcttattattcggagagggttaccctgaagctaagctg
attaaacttgagcaaaactatcgtagtacgccagcagtgcttgattatatcaatgctctg
tctgctcagatcaccttgggttaccaaaagcagctgtactctggggtttctatagaaggt
gtaaaaccaatatttcgccgacttagcgatgagagcaaagaagcaaagtatattgctgat
agaattatcgaattaaaaccagactatgattatcaagactttgcggtattgtgccgaacg
tcctttcaatctaactacgtccagctagaatttatggaacgtaatatcccgtttattgtc
gtaggcggtattcgttttattgaaagacgccacattaaagacgtcttagcatttgttaag
atactttataacccgaatgataccattgcatggcaccgtattttgaccttatttaaaggc
gtagggtcggtgactgctacgcgcttaacccaagcgattaatgctgacaataactctttt
gagccgttattaacaacaaagtttgccaaaaaaagcacgcaacttgagccgctgtataaa
atgctaagtcaagccagccaagcagagtcggtcgaagccattatcgagctgattctagat
ttttatatgcccgttttaaaaatcaatgaagacaattggcgtgagcgtagcgaagatttt
cgtgtgctcaaaaatctagcgttagagcatgatagcctagataaatttttagaaaatctg
gcactcgatccacctaatgactcggttgccaccgaaggtgagcctgaaaaaggcgaagaa
ggtatcgacaaaaacagggataaagtgactatttcgaccattcatagtgccaaaggactt
gaatggccagtggtatttgtaaattcattggtcgatggtatgacaccgcatcatcgctca
ttaagcgattttgaagaattagaagaagagcgtaagctgttttatgttgcttgtagtcgt
gcaaaaagcaggctgtttttaactgcgcccgattatttttcgagctattcaggctatttt
gataaagtgtcacggtttatcgctgaagtacctgctgataagataacggtgctaacggta
aaacagcctttagaagagagtgatgatccagtttggtggtga
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