Psychrobacter sp. G: PSYCG_06235
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Entry
PSYCG_06235 CDS
T02715
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pso
Psychrobacter sp. G
Pathway
pso00061
Fatty acid biosynthesis
pso00071
Fatty acid degradation
pso01100
Metabolic pathways
pso01212
Fatty acid metabolism
pso02024
Quorum sensing
pso04146
Peroxisome
Module
pso_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSYCG_06235
00071 Fatty acid degradation
PSYCG_06235
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSYCG_06235
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSYCG_06235
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pso01004
]
PSYCG_06235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pso04147
]
PSYCG_06235
Enzymes [BR:
pso01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSYCG_06235
Lipid biosynthesis proteins [BR:
pso01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSYCG_06235
Exosome [BR:
pso04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSYCG_06235
Exosomal proteins of breast cancer cells
PSYCG_06235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
AGP48769
LinkDB
All DBs
Position
complement(1411999..1413699)
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AA seq
566 aa
AA seq
DB search
MTTDKPWLAQYPANVPKTINPDQYESLIELYEECFDRFRMHPMTICMGVSHTYGDVDKAS
LAVAAWLQAQDIPKGSVVAVMMPNVPQYLPTMIGILRAGYVCTPINPLYTGRELRHQLND
SGAQVIFVVDNFAQALEQVIEETNIKRIVLSKMGDMMGLKGILVNTVIRQVKRLVPKYNL
NDPKYNVTKFPDVLKKGKNLPFQTPKTSLQQKAILQYTGGTTGLSKGAILTQRNVVAAAM
QSEAWYRPVTSEINEVYINMVMALPLYHIFAFMLSLLGMRSGYTFILIPNPRDMPGFVKT
LSKQPFHIFPAVNTLFKGLLDQPTFKNLDFSALRISQAGGMAATEQTAARWLEVTGCPMV
EGWGMTEGVAAGTANVITDRKFNGTIGIPVPSVDVIVVDDNGETVGFNQSGEMCIKGPNI
TSGYFNKDNTNDFTKEGYFRTGDIISMDEKGYITLLDRKKDMILVSGFNVFPNEIESVML
DCKGIIDCAVIGISDEHQGEAVKIYIVPADNNVTKSDIKEFALDNLTGYKCPRHIEFVSE
LPKSNVGKILRQKLREKHMADNPQML
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgacaacagataaaccttggcttgctcaatatccagcaaacgtacccaagactattaat
cctgatcagtatgaaagtctcatcgagttgtatgaagagtgttttgaccgcttccgtatg
catcctatgaccatctgtatgggcgtttctcatacttatggagacgtggacaaagcgtct
cttgctgtcgctgcttggttgcaagcacaagatatccctaaaggtagcgtagtggcagtc
atgatgccaaacgtgccgcaatacttaccgacgatgatcggtatattgcgcgccggctat
gtttgcacccctatcaacccactatatactggtcgtgagctacgtcatcaactcaatgat
tcaggcgctcaggttatttttgtcgtcgataactttgctcaagcacttgaacaagtcatt
gaagagacgaacatcaaacgtattgtcctatcgaaaatgggcgacatgatgggactaaag
ggtattttggtcaacaccgttattcgtcaggtcaaacgcttagtgcctaagtacaacctg
aatgaccctaagtataatgttaccaaattccctgatgtgcttaaaaaaggcaaaaacctg
ccttttcaaacaccaaaaacctcactgcaacaaaaagctattttacaatataccggcggt
acaacaggcctatctaaaggcgctattttaacccagcgtaacgttgtcgctgctgccatg
caatcagaagcatggtatcgccctgttacctctgaaatcaatgaggtgtacatcaatatg
gtcatggcattgccgctatatcatatatttgcctttatgctgagcttgctaggtatgcgt
tcgggttatacttttatattaatacctaatccacgagacatgcctggatttgtcaaaacc
ttatcaaaacagcccttccatatttttcctgccgtcaataccttgtttaaaggactactt
gatcaaccaacctttaagaacctagattttagcgcattacgtatctcacaagcaggcggt
atggcagcgactgagcagacggcagcacgctggttagaagtcactggttgcccgatggtt
gagggttggggtatgactgaaggggttgcagcaggtactgctaacgtcattactgatcgc
aagttcaatggcactattggcattcctgtacctagtgtcgatgttattgtggtcgatgat
aatggcgagaccgtaggttttaatcagtctggtgaaatgtgcattaagggaccaaatatc
acctcaggatattttaataaagacaacaccaatgactttactaaagagggttacttccgt
actggtgatatcattagtatggacgaaaaaggctatatcactttacttgatcgcaaaaaa
gacatgattttggtatcaggatttaacgtctttccaaatgagattgagtcagttatgcta
gattgcaaaggtattattgattgcgcagtgattggcatttctgatgagcatcaaggcgaa
gcagtcaaaatttatatcgttcctgctgataacaatgttaccaagagtgatattaaagaa
tttgccttggacaatttgactggttacaaatgcccgcgtcatattgaatttgtgagtgag
ttgccaaagagtaatgtgggtaaaatattgcgtcaaaaactgcgtgaaaaacacatggca
gataaccctcaaatgttataa
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