Psychrobacter sp. G: PSYCG_06795
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Entry
PSYCG_06795 CDS
T02715
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pso
Psychrobacter sp. G
Pathway
pso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSYCG_06795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_06795
Enzymes [BR:
pso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSYCG_06795
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSYCG_06795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGP48879
LinkDB
All DBs
Position
1550390..1554850
Genome browser
AA seq
1486 aa
AA seq
DB search
MFTIIQSHRTENLVDQLLVQYQSKSQPVFEPFIVIVPSMVLGDWLDKTIASRAGISTLVR
TKFWGQYQWTLMQDVLTRHNAYLLGQNPEATTLNVPEVAVLSPTVMQWRLFGYLTYYQES
IIKDEKHPVNPLLASLIDEPQAGVEQDNVRQDKSQQDARIWQLSNDLARVFNRYLTHRED
WLALWSHNKPLNVNELIADKDALSLRFDKYARGTPEWLVEHYVELEVAQRFLWSHLFADV
HQHRVVLEEVFWQALKSNKAGEQSQLPKVLRIFTIQQLPQTELDFLQRLSQYMNITLLHY
NPSKLFWADIVDKSWLQRQQIINPESVFLRDYGHSLLSRLGKQSRDAFAMLANLSGNEQY
DDALVEWQDNFDDTLSIGSNHGFAAEYIDDASSAQNSPSLLRRLQNDVLMLDEQSTQQAT
AAKVSQEMSKQIELGFDQELHQTPWYEDEALENKRFEKDRFWAMSAQDNSLSIHSCHSLQ
RQLEVLRIMIGRWLNKPIKPGEKKRHISDIVVLLPDVERHHALIGSIFVNGKGQDGLTLP
AKVTGVVDADIRQLWEAIIGFYKLLGSHSARFEAAEVLDWLMLPPLFESFGLTHEQMSRG
CDLLVEAGFIRGFDELHLKQTLDSNDFDYRFSFAQALDRLTLGLVMPEASLSDCLYPLSQ
DDWPINALPEMTLPLPQVNLNDALIVEALCRIYTGLVARRDDHTQKMKAEDWLDQIELQV
IHRYFGDVDQTRTMRAIYNAMNGFKSSLRANRHYRQYASGDIDNREVEQRLAGVEQLPLK
LSFMLDSIEAELESQQVSAEPTGVITFGRFGALRNVPFELVVMLNMDLSEFPGRDRDNRY
DLMKVTNARRGDRVSEDDDNGAFLDALLCARSACWMFYNGQSLTDTHEHLPANPVSELLQ
FLQGEVQWQVNSLEAFETLKNIDQTTESLKRYLPKLIKQWLLTEHPALPFHESLFETEIE
DTDISNHTAKPNQNADINIQNNSPVDMTDELDAILNKAMRKTKLAQKKQFPPAPLWQAVF
DTLKGRVSSEHPQLVGLPTKGQYESIAQILGQGLGQMGQVDNQTFSALIEMLALDNTADA
SDSSDMNEALIKTLFDTIFNIGEIDVEGVLVYQVRHPAKAFLRTQKVHVVQGEEALSQQE
PLFLDSLTTYQIKDHLINELTNNATNKNSDGKAKQDSQILMYQKIMPAGVARQTTLPNQQ
QKLQQQCLEFKEQLVANGFDEVGEDSAGGLELLTQTSEHPIQIELAAILNRTENESLLKL
LPKIIKIKGSVPILAPISVPIGTHNSRSHLQTGKSYAEQSPKQWLNILPNSASPRHLLKF
WLSHLYWQVARRTTAEQVVLDDGVSIWRFNKPNSQVKKYDKVIAFKLSPIVYEDAAAELI
KWAIFAKLSGQVPITLLPEYALSYLDKCLKSEESENGSYWPKRADFSDWLRPSYHTDTIY
DTCLQHAIWQYVLRDQDAFKALSAALTTLAKPLYEPMFSALDGLDG
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccattatacaatcccatcgtaccgaaaatcttgttgatcagcttcttgtgcag
tatcagtccaaaagtcagcctgtttttgagccttttattgtcattgtgccttcaatggta
ttgggtgattggttggataaaaccattgccagccgtgctggtattagtaccttggtgcgt
actaagttttggggacagtatcaatggacgctgatgcaagatgtattgactcgccataat
gcgtacttattggggcaaaaccctgaagcgacaactctaaacgtgcccgaagttgcggtg
ttgtcaccgacagtaatgcaatggcgattgtttgggtatctgacttactaccaagagtcg
attattaaagatgaaaaacatccggtgaatccgctgctggcgtctttgattgatgagcca
caagctggagttgagcaagacaatgtacgacaagataagtcgcagcaagatgcgcgtatt
tggcagctgtcaaatgatctggcgagggtgtttaatcgctatttgacccatcgtgaggat
tggttggcattatggtcgcataataaaccgctgaatgtgaatgagttgatagcggataaa
gatgccttgtcactgcgctttgataagtatgcgcgtggcacgcctgagtggttagtggag
cattatgttgagttagaagttgctcaacgcttcttatggtcgcatttatttgcggatgtg
catcagcatcgtgttgtattggaagaggtgttttggcaagcactaaagtcaaataaggct
ggcgagcaaagtcagttacccaaagtgctgcgtatctttaccatccagcaactaccacag
accgagctagatttcctacagcgcctgtcgcaatacatgaatatcacgctattgcattac
aatccatcaaagcttttttgggccgatatcgtcgataaatcatggttacagcgtcagcag
attatcaatcctgaaagcgtgtttctgcgtgattacggccacagtttgctatcacgtttg
ggtaagcaatcgcgtgatgcgtttgcgatgctggctaacttgtctggtaatgagcagtac
gacgatgcactggttgaatggcaagataattttgatgatacgctgagcattggttctaat
catgggtttgctgctgagtatatcgatgatgctagtagcgctcagaatagtccaagctta
cttagacgtttgcaaaacgatgtgttgatgcttgatgagcaatctacccagcaagcgacg
gctgcaaaagtttcgcaggagatgagtaagcaaatagagctaggctttgatcaagagctg
catcaaacaccatggtatgaagatgaggcattagagaataagcgctttgaaaaagaccgc
ttttgggcaatgtctgcgcaagataatagcctaagcatccattcgtgccatagtttacag
cgtcagcttgaagtactacgtattatgattggtcgttggctaaataaacctatcaagccc
ggtgagaaaaaacgccatatctccgacattgttgtgctgctacctgacgttgagcgtcat
catgcattgattggctctatcttcgtcaatggtaagggtcaagacggtttgaccttgcct
gcgaaggtaactggtgttgtcgatgccgacattcgccagttatgggaagcgattatcggt
ttttacaaactattgggtagccatagcgcccgttttgaagcagctgaagtcttagattgg
ctcatgttaccgcctttatttgaaagttttggactgactcatgagcaaatgagccgtggc
tgtgatttgttggtagaggctggctttatccgcggttttgatgagctacatcttaaacaa
actctagacagtaacgactttgattatcgatttagcttcgcgcaagcgctagatagacta
acgttaggtttagtgatgccggaggccagtctgagcgactgcttatatcccttatctcag
gatgattggccgatcaatgcattaccggaaatgaccttaccgctaccacaagtgaaccta
aatgatgcgctgattgttgaagcgctttgccgcatttataccggcttggtcgcacgacgt
gatgatcatacacaaaaaatgaaagcggaagactggcttgatcagattgagctacaagtt
atccatcgctactttggcgatgtggatcaaacgcgtaccatgcgcgccatttacaatgcg
atgaatggctttaaatcaagtctgcgagccaatcgtcactataggcagtacgctagtggt
gatatcgataacagagaagtagagcagaggctggcaggtgtagagcagttgccgctaaag
ctaagctttatgctagacagtatcgaagcggagcttgaaagtcagcaggtcagtgcggag
ccaactggggtaattacctttggtcgttttggtgcactaagaaatgtgccttttgagttg
gtagttatgctcaatatggatctctctgagtttcctgggcgtgaccgtgataaccgctat
gatttgatgaaagtgactaatgcacgtcgcggtgacagagtcagtgaagatgatgacaac
ggcgcatttttagatgcgctactgtgcgcgcgcagtgcatgctggatgttctataacggc
caaagcttgacggacactcatgagcatctgcctgccaatccagtgagtgagctattgcag
tttttgcaaggcgaggtgcaatggcaggtgaactcgcttgaagcatttgaaacacttaag
aatattgaccaaactaccgagagcctcaagcgctatttgcctaaattaattaagcagtgg
ctgctgactgagcatcctgcactgcctttccatgagagtctgtttgagacagaaattgaa
gatactgatatttcaaatcacactgctaaacccaatcagaatgcagatatcaatattcaa
aacaacagtcctgtagatatgactgatgaattagacgctatcttaaataaagccatgcgc
aaaaccaaattagcgcaaaaaaagcagttcccgcctgcgccgctttggcaagctgtgttt
gatactttgaagggtcgagtatctagcgagcatccacagctagtaggattacctacaaaa
gggcaatatgaatctattgctcagattctcggtcaaggtttggggcaaatgggacaagta
gataatcaaacattctctgcattaattgagatgctagcgctagataatactgctgatgcc
agtgatagtagtgatatgaatgaggcactcatcaagaccctatttgatactatatttaac
attggagagatagacgttgagggagtattggtctatcaagtgcgtcatcctgccaaggct
tttttgcgtactcaaaaagtgcatgtagtgcaaggtgaagaagcactgtcgcaacaagag
ccgctattcttggacagtctgactacctatcaaatcaaagatcatttgataaatgaattg
accaataatgccaccaataagaatagtgatgggaaggctaaacaagacagtcaaatcttg
atgtatcaaaaaatcatgccagcaggtgtggctcgtcaaaccacgttgcccaatcaacaa
caaaaactgcaacagcaatgtctagagttcaaagagcagttagttgctaatggctttgat
gaggttggagaggatagcgcaggtggtttagagttactgactcaaacctctgagcacccc
attcagatagagctggcagctatactaaatcgtactgaaaatgagtcactgcttaagtta
ctacctaaaattattaagataaaaggctcagtgccaatattagcaccaatatcagtgccg
ataggtactcataatagtcgctctcacctacagacaggtaagtcctacgccgagcaatcc
cccaaacagtggttaaatatattgcccaattctgccagtcctaggcatttactcaaattt
tggttgtcgcatttgtattggcaagttgccagacgcaccactgccgagcaagtggtatta
gatgatggtgtgagcatttggcgctttaataaacctaattcgcaagtcaaaaaatatgac
aaagtcattgcatttaaactaagccccattgtgtatgaagatgcggcggccgagctcata
aaatgggcaatttttgccaagctatcaggtcaagtacctattacactcttgccagaatat
gcgctcagttatcttgataagtgcctaaaatctgaagagagtgagaacggtagctattgg
ccaaaacgagcagacttctcggattggttaagacctagctatcacacagatacgatatat
gatacttgcttgcagcacgccatttggcagtacgtactgcgtgaccaagatgcgtttaaa
gcgctatcagcagcgttaactaccttagcgaagccgctatatgagccaatgttttctgca
ctagacggtctagatggctag
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