Psychrobacter sp. G: PSYCG_06800
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Entry
PSYCG_06800 CDS
T02715
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
pso
Psychrobacter sp. G
Pathway
pso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSYCG_06800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_06800
Enzymes [BR:
pso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSYCG_06800
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSYCG_06800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGP48880
LinkDB
All DBs
Position
1554915..1559390
Genome browser
AA seq
1491 aa
AA seq
DB search
MTNFTDISDIADISIQPYLSNEYLDESRNRFDTPENDAMSGVINEQKVDVIPAVDVALMG
RHLIEASAGTGKTWTLTGIMLRLLIEARRAPEQIIATTFTRAAAAEMRQRIHDRLVDFYQ
LLQWVNSLSADTSNKDALYPNVLQVTPESNKDKQAGKGSSVDSNAGTGTDEFNQDIAADK
QAAAEKRKQVKKDRENWLVNQAKYARLDAVMDDPINLHLTGFLLDHVHSYPMAEAIRRTA
LVLTTLDKLFVGTLDSLAQKWLIEYSSETGHQQGMAIIEDSSIEQVTDSIIHDELRQFQS
RLYHEEPKLYALMDQQGKLTAVSDHKKYVTRSLNFISAPIDDVVVKSFSFEGYERLINTI
IECSDELDVFFKPDGEYYEVPKGQLLNNRDSWPKIIQTLEDSGPTAYKSISDSKTYTGKL
IEAFQKTDNIGSQFRVPKDGERINLIFNELQVVRDFKRYIEESKKLDEYITAILANLNRH
IVLAVRDRLPVILEERGETTFSLQMVRLNQALTGRQGDKLARYIRHHYPVALIDESQDIN
GEQAIMIESIYLPKNKRKQSDNDKQSTTKKANHEFLLLVGDPKQAIYGFRGGDVANYNYM
KAQFDKSTLWTLDINRRSNAGVINALNCWFGMPTITTAENKLAQLGSSIYYQHIKAAKPE
NQLSWFNEPTTQNSTLVTEVLSAQPVSLLHLPYDKDKELEYDEFEITARHIATLLSSDQT
LKSKPIQPSDIGVLARTKKDLKRVEDELVKLNVPTLTTSDVSIFETIMAEDVAALLSAML
YPYRHDMINRVLTSHLYGLSIKEVKAMMTDHESGVTEGSHLSSASTKAVNNKKSYQDFIT
YLKQAAQNWQHFGVLSALHYLLDKNPVQPQGVWQALATHPEGDRHIMDLRHMMDVLAQYG
IGMGEHELLAWFRQNIYAAPNSDWAKQYPLPTESGVQLMTIHKSKGLEFPIVYVLGMGDA
SRKAGNNEKFGLYLYNAQQAPSILMQQSAENQSTGNQRRFSPVQGSVTTESHYTDIETQE
GFDELRRLGYVAFTRASEQLYVVLRDPNNKTGFELKPAFYWLESPEAKFNLPDRLKGNIG
IIRGHNVNEFYNNDSNGANALGLAGNATLATAKSITETIEYAPFAEVMKTNYFYGWAKTS
FTALARQLDESTQALAVVDERMDDAIDIDMTESVVSSSNSVFFKPISELSLKSEDNIRFT
FVKGANAGTFLHEIFEKIDFNNKSQWSQVIDRAVSSYQLPLVYSSAEQQSRLLQAKNKED
GRIPDLDSIDATKHEALLNWIEEVLQAPLLASNQPLCSINASQRFAELEFNMGLSERFKA
QDINSLFQQYLPNEADKHVNLIPQNKAHLYRYLRGEIDLVYEHAGKYYVVDYKSNFLGNS
LSDYDESTLKQAMSKAGYWLQAAIYQVALHRFLAMRISDYAGNEDKYLGAVEYVFLRGVY
DSNSQITADLSQDVREADNSHSMPNDRYGLVTWDIPIEFIKALDALFGLPD
NT seq
4476 nt
NT seq
+upstream
nt +downstream
nt
atgactaattttaccgatataagcgatatagctgatatatctatacagccttacttatcc
aatgagtacctagatgagtcacgtaaccgattcgatacgcctgagaatgacgctatgagt
ggagttataaatgagcagaaggtggatgtgataccggcggtagatgttgcattgatgggt
cggcatcttattgaagcctcagctggtacaggcaagacttggacactcacaggcattatg
ctacgactgctcattgaagcgcgccgtgcgccagagcagatcattgccactacctttact
cgagccgctgccgctgagatgcgtcagcgtattcatgatcgtttggtggatttttatcaa
ttattgcagtgggtcaatagtttaagtgctgacaccagtaacaaggatgctttgtatcct
aatgtactacaggtaacacctgaaagtaataaggataaacaagcaggtaaaggttcaagc
gttgattcaaatgctgggacagggacggatgagttcaatcaagacattgctgctgataag
caagcagcggctgagaaacgtaaacaagtaaaaaaagatcgtgaaaactggcttgttaat
caggctaaatatgcacgcttagacgccgttatggacgatcccattaatctgcatttgact
gggtttttacttgatcatgtccacagctatccaatggcggaggccattcgacgtactgcg
ctagtactaaccacgttggataagctgtttgtaggtacactcgacagtttggcgcaaaag
tggttgattgaatacagtagcgagaccggtcatcagcaaggtatggctattattgaagac
agcagtattgagcaggttactgacagtattattcatgatgagctgaggcagttccaaagc
agactgtatcacgaggaacctaaactatatgcgctaatggatcagcaaggcaagctgact
gcagttagcgatcataaaaaatatgtgactcgttcgcttaactttatttcagcgccgatt
gatgacgttgtagtaaagagtttttcttttgagggctatgagcggcttataaatactatc
attgagtgcagcgatgagcttgatgttttttttaagcctgacggcgagtattatgaagtt
ccgaaaggtcaattattaaacaacagagactcttggccgaaaattatccaaacattagaa
gattctggcccaactgcttataagtctatatcagactccaaaacttatacaggaaagttg
attgaggcttttcagaaaacggataatataggctctcaatttcgtgtacctaaagatggt
gaaagaattaatttaatatttaacgaattgcaggtcgttcgtgattttaaacggtatatc
gaagaaagtaaaaagctagatgagtatatcacggctatcttagccaaccttaatcgccat
atcgtgcttgcggtacgtgacagactaccagtcatcttagaagagcgtggcgagacgacc
tttagtttgcaaatggtacgcttaaaccaagcattaactggtcgccaaggggataagctg
gcgcgttatattcgtcatcattacccagtggcgttgattgatgagtcgcaagatatcaat
ggcgagcaagccattatgattgaaagcatttatttgccaaagaataagcgtaaacagtcg
gacaatgacaagcagtcaaccactaagaaagccaatcatgagtttctgctattggttggt
gatcccaaacaggctatttatgggtttcgtggcggtgatgtggccaactataactacatg
aaagcccagtttgacaagagtacgctctggacacttgatatcaatcgccgttcaaatgcc
ggtgtgattaacgcattgaactgctggtttggcatgccaacgataacgactgctgagaat
aaattagcacagctaggtagcagtatttattatcagcatatcaaagctgcaaagccagaa
aaccaactgtcttggtttaatgagccaactactcaaaacagtactttagtgacagaagtg
ctttctgctcaaccagtgagcttgttgcatctaccttatgataaagataaagagcttgag
tatgatgagtttgaaatcaccgcgcgtcatattgcgaccttgctcagtagtgatcagacc
ttaaaaagcaaaccgattcagcctagtgatatcggtgtgctggcacgtaccaaaaaagac
ttaaaacgggttgaggatgagctggttaagcttaatgtaccgaccttgactactagtgat
gtcagtatctttgaaaccatcatggcggaagatgtggcagcattgctgagtgccatgcta
tatccatatcgtcatgacatgatcaatcgggtgctgactagccatctgtatggcctgagt
atcaaagaagtcaaagccatgatgactgaccatgagtcaggagtaacagagggtagtcac
ttaagtagcgctagtacgaaagcagttaacaataaaaaaagctatcaagattttattact
tacctaaaacaagcggctcaaaactggcagcactttggtgttttgtcagcattacattac
ttattagataaaaaccccgtgcagccgcaaggcgtttggcaagctctggcaactcatcca
gaaggtgatcgtcacattatggatttgcgtcatatgatggatgtcttggcgcagtatggt
atcggcatgggtgagcacgaactattggcttggtttagacaaaatatatatgctgctccc
aatagcgattgggctaagcaatacccgttaccgacagagtctggcgtgcagcttatgacc
attcacaagtccaaagggctcgaattccccattgtctatgtattgggcatgggcgacgct
agtcggaaggcgggcaataatgaaaagtttgggctgtatctatacaacgcccagcaagct
ccgtcgattttaatgcagcaatcggcagagaatcaatcaacaggcaaccagcgtcgtttc
tcacccgtacaaggctctgtgaccacagaaagtcactacactgatattgagacacaagag
gggtttgatgagctgcgacggcttggttatgtggcatttacgcgtgccagtgagcagctt
tacgtggtgttgcgagatcctaacaacaaaacaggttttgaattaaagccagcgttctat
tggttggaatcgccagaggcaaagtttaatttgcctgatagactcaaaggcaacataggc
ataattagagggcataatgtcaatgagttctataacaatgatagtaatggtgctaatgca
ttgggcttagcaggtaacgcaacgcttgccactgctaaatctataactgagactattgag
tacgcgccttttgcagaagttatgaaaaccaattatttttatggttgggccaagaccagt
tttacagctttagcccgtcagctagatgaatctacgcaggcgctggctgtggtagatgaa
cgtatggatgatgccatagacattgatatgacagagtcggtagtatcgtccagtaatagt
gttttttttaaaccaatcagtgagttgagcctcaaatcagaggataacatccgttttact
tttgtcaaaggcgccaatgccggtacgtttttgcatgaaatatttgaaaaaattgatttc
aataataaatcgcagtggtctcaggtgatcgatagagccgttagtagttatcagctacct
ttggtttatagtagtgctgaacagcaaagtcgactattacaagcaaagaataaagaagat
ggtcgtatacctgacttagattcaatagatgctacaaagcatgaggcattacttaactgg
attgaagaggtgctacaggcgccgttattagcgtctaatcaaccgttatgctctatcaat
gcaagtcagcggtttgctgaattagagtttaatatggggctatcagagcgttttaaggcg
caagatattaatagcctatttcagcagtatctcccgaatgaagcggacaaacacgtcaat
cttattccacaaaacaaagcgcatttgtatcgttatctgcggggtgaaatcgatttggtg
tatgagcatgctggcaagtattacgttgtcgattacaaaagtaattttttaggaaatagc
ctaagcgattatgacgaaagcacactcaagcaagcaatgtcaaaggcaggatattggtta
caggcagcaatttatcaagtcgcgttacatcgtttccttgcaatgagaattagtgattat
gcaggtaatgaagataagtatcttggcgctgttgaatatgtctttttacggggcgtatat
gattcaaattctcaaataactgctgatctatcgcaagatgtcagagaagctgataatagt
cactcaatgcccaacgaccgctatggattagtcacgtgggatattccaattgagttcatt
aaggccctagatgcattgtttggcctgccagattag
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integrated database retrieval system
