Psychrobacter sp. G: PSYCG_06805
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Entry
PSYCG_06805 CDS
T02715
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pso
Psychrobacter sp. G
Pathway
pso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PSYCG_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_06805
Enzymes [BR:
pso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PSYCG_06805
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSYCG_06805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
AAA_22
Helicase_RecD
Herpes_Helicase
SLFN-g3_helicase
UvrD-helicase
PhoH
AAA_16
nSTAND3
UvrD_C
ResIII
AAA_24
NPHP3_N
AAA_28
UTP20
Motif
Other DBs
NCBI-ProteinID:
AGP48881
LinkDB
All DBs
Position
1559467..1561662
Genome browser
AA seq
731 aa
AA seq
DB search
MSNNNNKSRAGVSLQESWASNISDYILMRRQQTHLAYNVTEAKANADSKQIDKTEQNGLF
TALFVMLATHLEEGHTVLTIEETEHEVPLSGQINGELITLYAWQQQLLEMLATPILALID
IQTVTQQEDDSTAELSLFILLDIMFGKRAQLWAQLALTNREKEILSKRFDAVAALYQLVK
NTNLNSFIQPIHEHTLFADANSNVNSKNSLSKSNQPIVYQHINKPEADTQNIKITFWLHR
AWQAEFNLAQHINTILNQQITPLEIAIPENLHEQQVMAINVANNNAFSIITGGPGTGKTY
TVAQLVIALQQATESGGDEYGKIRFSTDSASLALAAPTGKAAQRMQESLQAALDGANVEL
QLQEAKTIHRLLGIGRTGRPRYNANHPLGEDIIIVDEASMLGVELANYLVSAVKPGARLI
LLGDANQLAAVDAGAVLADLCRIPLLQPIHAKLTESRRFSADSGIGKLANQINKTEADTQ
AIWQLLRQDKALSFQYVNTLQTETVIDNKIQNSLSNYKIISNLTLNYYPYLNKVESLLKN
PIEKSMPESVKSTITSLMQTFNQFRVLSAGHNGEWGDHYINNHITQWHLTELKLPLGQNT
WFHGRPVMVLQNNYELGLFNGDIGFCLQTGDERSRLEVFFENKAQGIAVNLLNEDVIATA
YAMTIHKSQGSEFDHVAITFDNSHARLLSKELIYTAVTRAKKQVSIYSTKHAFEKAVQTP
TERHTGLALQF
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataataataataagagcagagcgggcgttagcttacaagaaagctgggctagt
aacatcagtgattatatattgatgcgccgtcagcaaacgcacttagcgtataacgtcact
gaggcaaaggctaatgctgatagtaagcaaatcgataagacggaacaaaatggcttattt
actgctttattcgttatgttggccactcatttagaagagggacatactgtactcaccatt
gaggaaactgagcatgaagtgccgcttagcggtcaaatcaatggcgagctaatcacccta
tatgcctggcagcagcaactattagagatgctagcaacgccaattctagcactgattgac
attcaaacagttactcagcaagaggatgattctacagctgagttatcattatttatcctg
ctagacatcatgtttggtaagcgagctcagctatgggcgcagctggcactcaccaatcgt
gaaaaagagatactcagcaaacgctttgatgcggttgctgcactttatcagctagtgaaa
aacacgaatctaaattccttcattcagcccattcatgagcatactttgttcgctgacgct
aattctaacgtgaatagtaaaaatagcctaagcaagagtaatcaacctattgtgtatcag
cacattaataaaccagaggctgatacacaaaatattaagatcactttttggttacatcga
gcttggcaagcagaattcaacttagcacagcacattaatactattttgaaccaacagata
acccctttagagatagcgataccggaaaacctacatgagcagcaggtaatggctattaat
gtcgctaataacaatgcctttagtattattactggtggtcccggtacagggaagacctat
acggttgctcagttagtaattgctctgcaacaagctacagagagtgggggtgatgagtat
ggaaaaattcggttcagtacggacagtgccagcctagccttagcagcaccgactggtaag
gctgcccagcgaatgcaagagtctttgcaagcggctctagatggagcgaatgtagagcta
caactgcaagaagccaagaccattcatcgcttattaggcattggtcgaacaggtagacct
cgttacaatgcaaatcatccactcggcgaagatattatcattgtcgatgaggcatctatg
ttgggggtggaactggctaattaccttgtgagtgcggtgaaaccaggcgcaaggcttata
ttgttaggagatgcgaaccagctagccgcagtagatgctggggcagtattggctgactta
tgccgcattccattgctacaacctatacatgcaaagctaacagaaagtcgccgatttagc
gcagactcagggattgggaagcttgccaatcaaattaataagacagaggcagatactcaa
gctatttggcagttgttaaggcaggacaaggcactgagttttcaatatgtaaatacgttg
caaacagagacagttatagataataagatacaaaatagcctaagcaattataaaattatt
tcaaacctcactctaaattattatccatacctaaataaagttgaatcactactaaagaat
ccgatagaaaaatccatgccagaatcagtaaaaagtacaattacttcattaatgcaaacg
tttaatcagtttagagtcctaagtgctggtcataatggcgagtggggtgatcactacatt
aataatcatatcactcaatggcatcttactgagctaaagctacctctaggtcaaaataca
tggtttcatggtcgtcccgttatggttttacaaaataactatgaacttggattgtttaat
ggtgatatcggtttttgcttacaaacaggagatgaaagaagccgacttgaggtattcttt
gagaataaagcacagggaattgccgtcaatctgctaaatgaagacgttatagccacagca
tatgcaatgaccattcataaatcgcaggggtctgagtttgatcatgtggccattactttt
gataatagtcatgcaaggcttttgagcaaagagcttatttatacggcggtaacccgcgct
aaaaaacaggtgtctatatatagtacaaaacatgctttcgaaaaagcagttcagacaccg
actgagcgccatacgggtttggcactgcagttttag
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