Psychrobacter sp. G: PSYCG_11770
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Entry
PSYCG_11770 CDS
T02715
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pso
Psychrobacter sp. G
Pathway
pso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PSYCG_11770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pso03021
]
PSYCG_11770
03400 DNA repair and recombination proteins [BR:
pso03400
]
PSYCG_11770
Enzymes [BR:
pso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PSYCG_11770
Transcription machinery [BR:
pso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
PSYCG_11770
DNA repair and recombination proteins [BR:
pso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
PSYCG_11770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
AGP49829
LinkDB
All DBs
Position
complement(2704508..2708728)
Genome browser
AA seq
1406 aa
AA seq
DB search
MKDLLDIMQSPTGNGNHEFDSIQITLASPDVIKSWSHGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDFECLCGKYKRRKFQGVICEKCGVEVTTAKVRRDRMGHIDLASPVAHIWFLK
SLPSRIGLLLDMTLRDIERVLYFESYIVTEPGLTSLEKYQLLDDEDYYKALEEFGDEFTA
KMGAEAVQDLLKDIDLDLEIDELRESIPQTGSETKLKKMSKRLKLLEAFRDSNNKPEWMV
MNILPVLPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKRLLELSAPDIIVRNEKRM
LQESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVIVVG
PTLRLHQCGLPKKMALELFKPFTYNKLLSHGLATTIKAAKKMVEREEPQVWDMLAMVIRE
HPVLLNRAPTLHRLGLQAFEPVLIEGKAIQLHPLVCTAFNADFDGDQMAVHVPLTLEAQL
ESRALMMSTNNILSPANGEPIIVPSQDVVLGLYYISRSSVNAKGEGMIFATVNEALRAIG
SNDLHVNAKIKVRVTETHIDDDGNRTKETSIKDTVAGRLLIWNIMPVGMSFDECNEEMTK
KNISKLINSCYRKVGVKESVMFADQLMYLGFAQATLSGVSIGIDDMVIPPLKKQIIEVAE
AEVREIEDQFEQGFVTAGERYNKVVDIWSRTNDKVAKAMMDNLATDKIINAKGEEEEQKS
FNSIFIMSDSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIKANFREGLTVLQYFISTHG
ARKGLADTALKTANSGYLTRRLVDVAQDLVITSDDCGTEQGLLMKPHIQGGEIIEKLGEL
VLGRVTARDVTYNDNAEKILIPAGTLIDEHWVKVLDNNAIDDIWVRSVITCNIEHGVCSQ
CYGRDLARGHKVNIGESVGVMAAQSIGEPGTQLTMRTFHVGGAASSASVDNSISVRSAGQ
AHFENMKTVQHTDGHLVIVSRSAEIALTDELGRERERYKVPYGSSVLVKNEDQVEGGQTI
AKWDPHTHPIITEFAGTARFSEITDGLTATVKVDDATGMSSFEILATRDRSSSAKDLRPA
IILNTDEGKEVVYFLPAETIIRVSDGEKVAAGSILGRVPQASSGTKDITGGLPRVADLFE
ARRPKDHAIMAEMSGVVSFGKETKGKNRFIITNEDGEIHEELIPKWRQINVFENETVARG
EVIADGPQNPHDILRLKGQTALADYIVNEVQDVYRLQGVKINDKHIEVIIRQMLRKVEIT
DGGDSNHFKGDQVEYADIKALNAKLEAEDKFPVQFERQLLGITKASLATESFISAASFQE
TTRVLTAAAVTGKVDELRGLKENVVVGRLIPAGTGLAYHKARKEKAEQKLQDKDLNAAFD
MSATTDATDFASFDEAFAQELNQGNH
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagatttactcgatatcatgcaaagccctaccggcaacggtaaccatgaatttgac
agtattcaaattactttggcctcacctgatgtgatcaaatcatggtctcatggtgaagtt
aaaaaacctgaaacgattaactatcgtacctttaaacctgagcgtgatggtctattctgt
gccaaaatttttggcccagtaaaagactttgaatgtttatgtggtaaatacaagcgccgt
aagttccaaggtgttatctgtgaaaaatgtggcgttgaagtcactactgctaaagttcgt
cgtgaccgcatgggtcatatcgacttagcgagccctgttgcgcatatttggttcttaaaa
tcattaccaagccgtatcggtctattattagacatgacgctacgtgatatcgagcgtgtg
ctttattttgaaagctatatcgtaactgagccaggtctgacttctttagagaagtatcag
ctgcttgatgatgaagattattacaaagcccttgaagaatttggcgatgaattcactgcc
aaaatgggtgcggaagcggttcaagaccttttaaaagacatcgatttagatttagagatt
gatgagctgcgcgaatcaattccgcaaacgggttctgaaaccaagcttaaaaagatgtct
aagcgtcttaagttattagaagccttccgtgattctaataacaagcctgagtggatggtg
atgaacatcttgccagtactaccaccagacttgcgtcctctagtcccactagaaggcggt
cgttttgcgacttcagatcttaatgatctatatcgtcgtgtgatcaaccgtaataaccgt
ctaaagcgtctgcttgagctaagcgctcctgatatcatcgtacgtaacgaaaaacgtatg
ttgcaagaatcagtagatgccttgcttgataatggtcgccgtggtcgtgcgattactggt
agtaataagcgtccattgaaatctttggctgatatgatcaaaggtaagcaaggtcgtttc
cgtcaaaacttactaggtaaacgtgttgattattctggtcgttcggtgatcgttgttggt
ccaaccctacgtctacatcagtgtggtctaccaaagaaaatggcacttgaattgttcaag
ccatttacttataacaaactattgtctcatggtttggcgacgacgattaaagctgccaaa
aagatggtagagcgtgaagagccacaagtgtgggatatgctggccatggttatccgtgag
catccagtactccttaaccgtgcgccaacacttcaccgtttgggcttgcaagcatttgag
ccagtactaatcgaaggtaaagccatccagttacatcctctagtttgtaccgcgttcaac
gctgactttgatggtgaccaaatggccgttcacgtgccattgacattagaagctcagctt
gaatctcgtgcgctcatgatgtcgaccaacaacatcttgtctcctgcgaacggtgagcca
atcatcgtaccatcacaggatgttgtattgggcttgtattacatcagtcgctcgtcagta
aatgccaaaggcgagggcatgatttttgctaccgttaatgaagcattgcgtgcgattggt
tcaaacgatttacatgttaacgccaagattaaagttcgtgtcactgaaacgcatattgat
gatgatggcaatcgtactaaagagacgagtatcaaagataccgttgctggtcgcttgtta
atctggaacatcatgcctgttggtatgtcgtttgacgaatgtaatgaagagatgactaag
aagaatatctctaaactgatcaactcttgctatcgtaaagtgggcgtaaaagaaagtgtt
atgtttgctgaccaattgatgtatcttggttttgcacaagcgacactatctggtgtgtct
atcggtatcgatgacatggttattccaccactgaaaaagcaaatcatcgaagtcgctgaa
gctgaagtgcgtgaaattgaagaccagtttgagcaaggctttgtaacggctggtgagcgt
tataataaagtggtcgatatttggtcacgtactaatgacaaagtcgctaaagcgatgatg
gacaacttagcgactgataaaattatcaacgctaaaggtgaagaagaagagcagaagtca
tttaactctatctttatcatgtcagattctggtgctcgtggtagtgccgcacagattcgt
cagcttgctggtatgcgtggtttgatggctaagccagatggctcaatcattgaaacacca
attaaagcgaatttccgtgaaggtttgaccgtacttcagtactttatctcaacgcatggt
gcgcgtaaaggtcttgcggatacggcattgaaaacagctaactcaggttacttgacgcgt
cgtttggttgacgtagcacaagatttggttattaccagtgatgactgtggtactgagcaa
ggtttgctcatgaagccacatatccaaggtggtgaaatcattgagaagttgggcgagcta
gtactaggtcgtgtaacggcacgtgatgtcacttataacgataatgctgaaaaaatcttg
attccagcgggtacgttgatcgatgagcattgggttaaagtactagataacaatgcaatc
gatgatatctgggtacgttcagtgattacttgtaatatcgaacatggcgtttgttcacag
tgctatggtcgtgaccttgctcgtggtcataaagtgaatataggcgagtctgttggtgtt
atggcggcgcagtctatcggtgagcctggtactcagttgaccatgcgtactttccacgtt
ggtggagcggcaagttctgcttctgtggacaacagcatttcagttcgtagtgctggtcaa
gcgcattttgaaaacatgaagactgtacagcataccgatggtcatttggttatcgtatcg
cgttcagctgaaatcgctttgaccgatgagcttggtcgtgagcgtgagcgctataaagta
ccttatggttcaagcgttcttgtgaaaaatgaagaccaagttgaaggcggtcaaactatc
gctaagtgggatccgcacacgcatcctattattacagaattcgcgggtaccgcacgtttc
agtgaaatcactgatggcttaactgctaccgtaaaagttgatgatgcgacgggtatgagc
tcgtttgagattctagctactcgagatcgttcaagctcagcaaaagacttacgtccggcg
attatcttgaacacagacgaaggtaaagaagtcgtttacttcttacctgctgaaaccatc
attcgcgtcagcgacggtgagaaagttgcagccggttcgattctaggtcgtgtaccacaa
gcgtcttcaggtaccaaagatattaccggtggtctgccacgtgtagctgatttattcgaa
gcacgtcgtccaaaagatcacgctatcatggcagagatgtcaggtgtcgtgagcttcggt
aaagagaccaaaggtaaaaatcgcttcattattactaatgaagatggcgagattcatgaa
gagctgatcccgaaatggcgtcagattaacgtcttcgaaaacgagactgttgctcgtggt
gaggttattgctgatggtccacagaatccgcatgatatcttacgtctgaaaggacaaacc
gcgcttgctgactatatcgttaacgaagtgcaggacgtttatcgtctgcagggcgtaaaa
atcaacgataagcacatcgaagttatcattcgtcagatgttgcgtaaagttgagattact
gatggcggcgattcaaaccactttaaaggtgatcaagtagaatatgctgatatcaaagca
ttgaatgccaagctagaagcggaagacaaatttccagttcagtttgaacgtcaattactt
ggtattaccaaagcaagtttggcaaccgaaagctttatctcagccgcatcgttccaggaa
acgactcgtgtcctaacggctgctgcggtcactggtaaagtggatgagttacgtggtctt
aaagaaaacgtagtcgttggtcgcttgattccagctggtactggtcttgcttatcataaa
gctcgtaaagaaaaagcagagcaaaaactgcaagataaagacttaaatgcggcgtttgat
atgtcagcaacgactgatgcgacagactttgcaagcttcgatgaagcctttgctcaagag
ttgaatcaaggtaatcattaa
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integrated database retrieval system
