Pseudomonas solani: PSm6_01130
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Entry
PSm6_01130 CDS
T09213
Symbol
pslN
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoa03032
]
PSm6_01130 (pslN)
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_01130 (pslN)
Enzymes [BR:
psoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
PSm6_01130 (pslN)
DNA replication proteins [BR:
psoa03032
]
Prokaryotic type
DNA Topoisomerases
PSm6_01130 (pslN)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PSm6_01130 (pslN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Sirohm_synth_M
Motif
Other DBs
NCBI-ProteinID:
BCD83706
LinkDB
All DBs
Position
118525..119556
Genome browser
AA seq
343 aa
AA seq
DB search
MTAATPPALPPQLRYVEDSMPGFARRLSRGKFVYIDLAGKPIRDELEIQRINKLAIPPAY
QQVWICADPQGHIQATARDARQRKQYRYHPLWIEIRDAAKYERLLRFGQALPALRGRIDL
HLGEAGLGRDKVMAAVVALLDRTLIRIGNSRYARDNKSFGLTTLRTRHVALKGNNIRFEF
KGKSGIEHSVRLSSPRLARILRRCLELPGQHLFQYLDEGAERRTVSSHDINDYLRSHAGE
DFTAKDYRTWAGSTLALEHLRKHRWQDEATAKKHLVEVIRQVSSELGNTPAICRKCYVHP
AIIEAFLAGELQGLKKARKRKGLSAEEASLMHFLQALHVAPAG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgacagccgcaacgccgcccgccctgccgccgcaactgcgctacgtcgaggacagcatg
cccggcttcgcccggcgcctgagccgtggaaagttcgtctacatcgacctggccggcaaa
ccgatacgcgacgagctggagatccagcgcatcaacaagctcgccatcccgcccgcctac
cagcaggtgtggatctgcgccgacccgcagggccatatccaggccaccgcccgcgatgcc
cgccagcgcaagcagtaccgctaccacccgctgtggatcgagatacgcgacgccgccaag
tacgagcgcctgctgcgcttcggccaggccctgccggccctgcgcgggcgcatcgacctg
cacctgggcgaagcggggctgggccgcgacaaggtcatggccgccgtggtcgccctgctc
gaccgcaccctgatccgcatcggcaacagccgctacgcgcgggacaacaaatccttcggc
ctcaccaccctgcgcacccgtcatgtcgccctgaagggcaacaacatccgcttcgaattc
aagggcaagagcggcatcgagcacagcgtccggctcagcagcccgcgcctggcgcgcatt
ctccgccgctgcctggagctgcccggccagcacctgttccagtacctggacgagggcgcc
gagcgccgcaccgtcagctcccacgacatcaacgactacctgcgcagccacgccggcgaa
gacttcaccgccaaggactaccgcacctgggccggcagcaccctggccctggagcacctg
cgcaagcaccgctggcaggacgaagccacggcgaagaagcacctggtggaggtgatccgc
caggtgtccagcgagctgggcaacaccccggccatctgccgcaagtgctacgtccatccc
gccatcatcgaggccttcctcgccggcgaactgcagggcctgaagaaggctcgcaagcgc
aaaggcctgagtgccgaggaagcctcgctgatgcatttcctccaggcgttgcacgtcgcc
ccggcgggctaa
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integrated database retrieval system
