Pseudomonas solani: PSm6_06910
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Entry
PSm6_06910 CDS
T09213
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoa03009
]
PSm6_06910 (rimO)
Enzymes [BR:
psoa01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PSm6_06910 (rimO)
Ribosome biogenesis [BR:
psoa03009
]
Prokaryotic type
ribosomal protein modification factors
PSm6_06910 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
RNase_II_C_S1
GbpA_2
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BCD84284
LinkDB
All DBs
Position
727663..728985
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AA seq
440 aa
AA seq
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MSTATPKVGFVSLGCPKATVDSERILTQLRMEGYEIVPTYQDADVVVVNTCGFIDSAKAE
SLDVIGEAIAENGKVIVTGCMGVAEDSIRDVHPSVLAVTGPQQYEQVVNAVHEVIPPKTE
HNPLIDLVPPQGIKLTPRHYAYLKISEGCNHTCSFCIIPSMRGKLVSRPVGDVLSEAERL
VKAGVKELLVISQDTSAYGVDMKYKTDFWNGQPVKTRMLELCQALSSMGVWVRLHYVYPY
PNVDDVIPLMAAGKLLPYLDIPFQHASPKVLKAMKRPAFEDKTLARIKKWREICPELTIR
STFIVGFPGETEEDFQYLLDWLSEAQLDRVGCFQYSPVDGAPANDMNLEPVPDDVKQDRW
DRFMAHQQAISAERLQLKIGKEIEVLIDEVDEQGAVGRSFADAPEIDGSVFIDSTDLKPG
DKVMVRVVDADEYDLWAERV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgcaacgcccaaagtcggtttcgtctcccttggttgccccaaagccacggtc
gattccgaacgcatcctcacccagctgcgcatggaagggtacgagatcgtcccgacctac
caggatgccgacgtcgtggtggtcaacacctgcggcttcatcgacagcgccaaggccgaa
tccctggacgtgatcggtgaagccatcgccgagaacggcaaggtcatcgtcaccggctgc
atgggcgtggccgaagacagcatccgcgacgtgcaccccagcgtgctggccgttaccggc
ccgcagcagtacgagcaggtggtcaacgcggtgcacgaggtgatcccgccgaagaccgag
cacaacccgctgatcgacctggtgccgccgcagggcatcaagctgaccccgcgccactac
gcgtacctgaagatttccgagggctgcaaccacacctgcagcttctgcatcattccctcc
atgcgcggcaagctggtcagccgcccggtgggtgatgtgctgagcgaagccgagcgcctg
gtaaaagccggcgtgaaggagctgctggtgatctcccaggacaccagcgcgtatggcgtc
gatatgaagtacaagaccgacttctggaatggccagccggtgaagacccgcatgctggag
ctgtgccaggcgctgtcgagcatgggcgtgtgggtgcgcctgcactacgtgtacccctac
ccgaacgtcgatgacgtgatcccgctgatggccgccggcaagctgctgccctacctggac
atccccttccagcacgccagcccgaaagtgctcaaggccatgaagcgcccggccttcgag
gacaagaccctggcccgcatcaagaagtggcgcgagatctgccccgagctgaccatccgc
tccaccttcatcgtcggcttccccggcgagaccgaggaagacttccagtacctgctggac
tggctgagcgaagcccagctggaccgcgtcggctgcttccagtactccccggtggacggc
gccccggccaacgacatgaacctggagccggtgccggacgacgtcaagcaagaccgctgg
gatcgcttcatggcgcaccagcaggcgatctccgccgagcgcctgcagctgaagatcggc
aaggaaatcgaagtgctgatcgacgaagtggacgagcaaggcgcggttggccgctccttc
gccgacgccccggagatcgacggcagcgtgttcatcgacagcaccgacctgaagccgggc
gacaaggtgatggtgcgcgtggtcgatgccgacgagtacgacctctgggccgagcgcgtc
taa
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