Pseudomonas solani: PSm6_07320
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Entry
PSm6_07320 CDS
T09213
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
psoa
Pseudomonas solani
Pathway
psoa03030
DNA replication
psoa03430
Mismatch repair
psoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSm6_07320 (dnaE)
03430 Mismatch repair
PSm6_07320 (dnaE)
03440 Homologous recombination
PSm6_07320 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoa03032
]
PSm6_07320 (dnaE)
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_07320 (dnaE)
Enzymes [BR:
psoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSm6_07320 (dnaE)
DNA replication proteins [BR:
psoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSm6_07320 (dnaE)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSm6_07320 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
HROB
Motif
Other DBs
NCBI-ProteinID:
BCD84325
UniProt:
A0ABM7L471
LinkDB
All DBs
Position
complement(764999..768523)
Genome browser
AA seq
1174 aa
AA seq
DB search
MTVAFVHLRLHSEYSLVDGLVRVKPLIKAVAGAGMPAVAVTDQSNMCSLVKFYKAAMGGG
IKPICGADIWLASPYEDGPLTRMTLLVMNAKGYRNLTELVSRGWSEGQSNDLVIIQRDWV
KEAAEGLIALSGSKEGEIGMALLNGDQAGAEALLAEWQAVFPDRFYLELQRTSRVNDEEH
VHAAVALADRCGALLVATNDVRFIKPGDFDAHETRVCIGESRVLDDPRRPRNFSDQQYLK
SPEEMAELFADIPEALQNTVEIAKRCNIEVQLGKHFLPDFPTPNGMGIDDYLRHASYEGL
EERLKVLWPKDTTPDYEEKRQLYIDRLEFELGTIIQMGFPGYFLIVADFIQWAKNNDVPV
GPGRGSGAGSLVAYVLKITDLDPLAYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
ADKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEAAFNQE
EALRDFLKVDEEAQEIWDMALKLEGITRGTGKHAGGVVIAPTKLTDFSPIACDEEGGGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIKWAMEMINRERVKEGKPLVDIDRIPLDDKKTYD
MLQKAETTAVFQLESRGMKELIKKLKPDCLEDMIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHPDYQYAGLEPVLKPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCSSNGIDENLSGNIFDLVEKFAGYGFNKSHSAAYGWVSYQTAWLKAHF
PSPFMAAVLTADMHNTDKVVTLIEECRNMKLRIVAPDVNNSEYRFTVDDAGQIIYGLGAI
KGVGEGPVEAITECRAEGGPFKDLFDFCNRIDLKRVNKRTLDALIRGGALDRLGPFFSEE
PKAYQAGIDRNRGVLLASMEEAIQAAEQTARSHDSGHMDLFGGLFAEPEADMYANHRNAK
ELSLKERLKGEKDALGIYLTGHPIDEYEGEVRRFARQRIVELKPARDTQTIAGLIVNLRV
MKNKKGDKMGFITLDDRSGRIEASLFADAFNSASALLQTDALVVVEGEVSHDDFSGGLRL
RAKRVMSLEEARTGLAESLRMKVDHSALQGDRLRWLADLCNRHRGSCPITLDYSGASAKA
LLQFGEQWRIDPADALIQALRDQFGRDNVFLHYR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcgccttcgtccatctccgtctgcattccgaatactccctggtcgacggcctg
gtacgggtcaagcccctgatcaaggccgttgcgggggccggtatgcccgccgtcgcggtc
accgaccagagcaacatgtgctccctggttaagttctacaaggcggccatgggcggtggc
atcaagccgatctgcggcgccgacatctggctggccagcccttatgaggacggcccgctg
acgcgcatgaccctgctggtgatgaacgccaagggttatcgcaaccttaccgaactcgtg
tcccggggctggtcggaaggccagagcaacgacctggtgatcatccagcgcgactgggtg
aaggaggccgccgaaggcctgatcgccctctctggttccaaggagggcgagattggcatg
gcgctgctcaacggcgaccaggcgggggccgaggccttgctggccgagtggcaggccgtt
ttccccgatcgcttctacctggagctgcagcgcacctcccgggtcaacgatgaggagcac
gtgcacgcagccgtcgccctggcagaccgctgtggtgccctgctggtggcgaccaacgac
gtgcgcttcatcaagcccggcgacttcgatgctcacgagacccgcgtctgcatcggcgag
agccgcgtccttgacgatccgcgccggccacgcaacttctccgaccagcagtacctgaag
tccccggaggagatggccgagctgttcgccgacattcccgaggcgctgcagaacaccgtc
gagatcgccaagcgttgcaacatcgaggtgcagctgggcaagcacttcctgcccgacttc
ccgacgcccaacggcatgggcatcgacgactacctgcgccacgcctcctacgaggggctg
gaagaacgcctcaaggtgctctggcccaaggacaccacgcccgactacgaggaaaagcgc
cagctttacatcgaccggctggagttcgaactgggcaccatcatccagatgggcttcccc
ggttacttcctgatcgttgccgacttcatccagtgggccaagaacaacgacgtgccggtg
ggccctggtcggggctcgggtgccggctccctggtggcttacgtactcaagatcaccgac
cttgacccgctggcctatgacctgctgttcgagcgcttcctcaaccccgagcgggtctcc
atgccggacttcgacgtcgacttttgcatggacggccgtgaccgcgtgatcgactacgtg
gccgacaaatacgggcgcaacgcggtaagccagatcatcaccttcggctccatggcggcc
aaggcggtggtgcgcgatgtggcgcgggtgcagggcaagtcctacggcctggccgatcgc
ctgtcgaagatgattcccttcgaagtgggcatgaccctggaggccgccttcaatcaggag
gaggcgctgcgcgacttcctcaaggtcgacgaggaagcccaggaaatctgggacatggcc
ttgaagctcgaaggcatcacccgtggtaccggcaagcacgccggtggcgtggtgattgcg
ccgaccaagctcaccgacttctcgcccatcgcgtgtgacgaggagggtggcggcctggtg
acccagttcgacaaggatgacgttgaagctgccggcctggtgaagttcgacttcctcggc
ctgcgtacgctgacgatcatcaagtgggccatggagatgatcaaccgggagcgggtcaag
gaaggcaagcccctggtggatatcgaccgcatcccgctggatgacaaaaaaacctacgac
atgctgcagaaggcggagaccaccgcggtcttccagctcgaatcccgcggcatgaaggag
ctgatcaagaagctcaagcccgactgcctggaagacatgatcgccctggtggcgctgttc
cgcccgggcccgctgcaatcgggcatggtggacgacttcatcaaccgcaagcacggtcgg
gccgagctgtcctacccgcacccggactaccagtacgcgggcctcgagcccgtgctcaag
cccacctacggcatcatcctgtaccaggaacaggtgatgcagattgcccaggtgatggcg
ggctacaccctcggcggcgcggatatgttgcgccgtgccatgggcaagaagaagcccgag
gagatggccaagcagcgtggcggcttcatcgaaggctgctccagcaacggtatcgacgag
aacctctcgggcaacatcttcgacctggtggaaaagttcgccggctacggcttcaacaaa
tcccactcggcagcctacggctgggtctcctaccagaccgcctggctcaaggcgcacttc
ccgtcgcccttcatggctgcggtactcacggcggacatgcacaacaccgataaggtggtg
acgctgatcgaagagtgccggaacatgaagctgcgcatcgtcgcgccggacgtgaataac
tccgaataccgcttcaccgtcgatgacgccgggcagatcatctacggcctgggcgccatc
aagggtgtgggcgagggccccgttgaggcgatcaccgaatgccgcgccgaaggtggcccg
ttcaaggacctcttcgacttctgcaaccgcatcgacctcaagcgcgtcaacaagcgcacc
ctggacgccctgatccgaggcggcgcattggatcgcctcggcccgttcttcagcgaagag
cccaaggcctaccaggcgggcatcgaccgcaaccgcggggtgctcctggcgtccatggag
gaagccatccaggctgccgagcagacggcgcgcagccacgacagcggacacatggacctg
ttcggcggcctgttcgccgaacccgaagcggacatgtacgccaaccatcgcaacgccaag
gagctgtccctcaaggagcggctcaagggcgagaaggatgccctggggatctacctcacc
gggcacccgatcgacgaatacgaaggcgaggtgcgtcgcttcgcccgccagcgcatcgtc
gagctgaagcctgcgcgtgacacccagaccatcgccggcctgatcgtcaacctgcgggtg
atgaagaacaagaagggcgataagatgggcttcatcaccctcgacgaccgttccggtcgc
atcgaggcgtcgcttttcgccgatgccttcaactccgccagtgcattgctgcagaccgac
gcgctggtggtggtcgagggcgaggtcagccacgacgatttctccggcggcctgcgcctg
cgtgccaagcgcgtgatgagcctggaggaggcccgcacggggctcgccgagagcctgcgg
atgaaggtcgaccacagcgccctgcagggcgatcgcctgcgctggctggctgatctgtgc
aatcgccatcgtggctcctgcccgatcacgctggactacagtggagcgagtgccaaggcg
ttgctgcagttcggtgagcagtggcggatcgaccccgccgacgctttgattcaggcattg
cgtgaccagttcgggcgcgacaacgtcttcctgcactaccgctga
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