Pseudomonas solani: PSm6_08810
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Entry
PSm6_08810 CDS
T09213
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
psoa
Pseudomonas solani
Pathway
psoa02024
Quorum sensing
psoa03060
Protein export
psoa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PSm6_08810 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSm6_08810 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSm6_08810 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psoa02044
]
PSm6_08810 (ffh)
Enzymes [BR:
psoa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PSm6_08810 (ffh)
Secretion system [BR:
psoa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PSm6_08810 (ffh)
Eukaryotic Sec-SRP protein
PSm6_08810 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_22
YqeC
AAA_33
cobW
AAA_31
AAA_16
APS_kinase
ABC_tran
ATP_bind_1
Mg_chelatase
Thymidylate_kin
AAA_24
AAA_14
AAA_19
AAA_30
KTI12
TsaE
6PF2K
ArsA_ATPase
AAA_17
Motif
Other DBs
NCBI-ProteinID:
BCD84474
LinkDB
All DBs
Position
complement(928508..929884)
Genome browser
AA seq
458 aa
AA seq
DB search
MFENLTDRLSQTLRHVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVNKVKERAV
GTEVSKSLTPGQAFVKIVQAELIELMGVANEDLSLAAAPPAVVLMAGLQGAGKTTTVGKL
ARFLKERKKKSVLVVSADVYRPAAIKQLETLAADIGVTFFPSDISQKPVDIAEAAIREAK
LKFIDVVLVDTAGRLHIDGEMMAEIQALHAAIKPVETLFVVDAMTGQDAANTAKAFGEAL
PLTGVVLTKVDGDARGGAALSVRAITGKPIKFLGMGEKSEALDPFHPDRIASRILGMGDV
LSLIEQAEQGMDREKAEKLAKKIKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPMLGGV
NLAQMGNAQGAAEKQFKQMEAIINSMTPLERRDPEVISGSRKRRIALGSGTQVQDVGRLI
KQHKQMQKMMKKVTAKGGMAKMMRGMGGMFPGGGMPKM
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaatcttacagaccgcctctcgcagacgctgcgccatgtcaccggcaaggcc
aagctgaccgaggacaacatcaaggacaccctgcgtgaagtgcgcatggccctgctcgag
gccgacgttgccttgcccgtggtcaaggacttcgtcaacaaggtcaaggaacgcgccgtc
ggtaccgaggtatcgaagagcctgacgccgggccaggcgttcgtgaagatcgtccaggcc
gagctgatcgagctgatgggcgtggccaacgaagacctgtccctggctgccgccccgccc
gccgtggtgctgatggccggcctgcagggtgcgggcaagaccaccaccgtcggcaagctc
gcgcgcttcctcaaggagcgcaagaagaagtccgtgctggtggtgtcggccgacgtctac
cgcccggcggcgatcaagcagctggaaaccctggccgccgatatcggcgtgaccttcttc
ccctccgacatcagccagaagccggtggacatcgccgaggccgcgatccgcgaagccaag
ctgaagttcatcgacgtggtgctggtggacaccgccggccgcctgcacatcgacggcgag
atgatggccgagatccaggcgctgcacgcggcgatcaagccggtggaaaccctgttcgtg
gtcgacgccatgaccggccaggacgccgccaacaccgccaaggccttcggcgaagcgctg
ccgctcaccggcgtggtgctgaccaaggtcgacggtgacgcccgtggcggtgccgcgctc
tccgtgcgcgccatcaccggcaagccgatcaaattcctcggcatgggcgagaagagcgaa
gcgctcgatcccttccacccggaccgcatcgcctcgcgcatcctcggcatgggtgacgtg
ctcagcctgatcgagcaggccgagcagggcatggaccgcgagaaggccgagaagctcgcg
aagaagatcaagaagggcaagggcttcgacctcgaagatttccgcgaccaattgcagcag
atgaagaacatgggcggcctcggcggcctcatggacaagctgcccatgctcggtggcgtc
aacctcgcgcagatgggcaatgcccagggcgcggcggagaagcagttcaagcagatggaa
gcgatcatcaactcgatgacgccgctggagcgccgcgaccctgaagtcatcagtggctcg
cgcaagcgccgtatcgccctcggctccggcacccaggtgcaggacgtcggccggctgatc
aaacagcacaagcagatgcagaagatgatgaagaaggtcaccgccaagggcggcatggcc
aagatgatgcgcggcatgggcggcatgttccccggcggcggcatgccgaagatgtaa
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