Pseudomonas solani: PSm6_09600
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Entry
PSm6_09600 CDS
T09213
Symbol
sbcC
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_09600 (sbcC)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSm6_09600 (sbcC)
Archaeal homologous recombinant proteins
PSm6_09600 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
cobW
T2SSE
ABC_tran
AAA_21
nSTAND3
AAA_15
AAA_22
TsaE
ABC_ATPase
NTPase_1
AAA
ApoA-II
Motif
Other DBs
NCBI-ProteinID:
BCD84553
LinkDB
All DBs
Position
complement(1012189..1015644)
Genome browser
AA seq
1151 aa
AA seq
DB search
MPLPSPGGFCMKILSLRLKNLNSLKGEWKIDFTGEPFAGNGLFAITGPTGAGKTTLLDAI
CLALYHRTPRMSSVSATVNELMTRHTADCLAEVEFEVKGVGYRAFWSQRRARDKVDGGLQ
APKVELARITDGEILTDKINDKLKQTESLTGLDFERFTKSMLLAQGGFAAFLEASANQRA
ELLEELTGTEVYGLISERVYQRTREAEASLGQLRARAEGVELLNAEQRQQLQNELAELNG
RESSLHGQQESLQRQRQWREALAGAEARQLAAVQQGQDARQALEQAGPQLQRLAESEPAE
RLRPPHRDWQRAGQAATEAAEALAQVREQKAQAAREVADGLWQARGYSQQRLAALAARRD
GLAEQRGQIEALLAANPQHGLLGERLGAWREQLGARRHLAQAIAQSLARQQQERQDAEQL
AQRIAGFQAALVESDQHLEQARAAEALRQAALATLLAGDSETALRERWQRLSDQGHQLAR
LQQLAENRTRLEQQLAAAQDGIEADSQAQAQKIATRDALRLQFTDLKQQIQDKEKLLEQE
QRILKLEAHRAALQPGEACPLCGSHEHPAIAAYGALDVSETQAALQAKRAEQEQVRERGA
ALNTELAALDAHLRQRQQDEQRLQDELQQLQAQWQQHCTALGQPLVDGPAVAAAQAQQQA
DLAALQRSLGELDGLKQAVDAARGQREQAQKHQQDAMQQHALAVQEQGALRRREAENTEQ
LGQLQAQQVRQESELGAALGELGYALPEDNERWLDARDAEWRTWRDAQALQQRLERDEQL
LLAELQTAEGAATRWQQRWGELAQPDVEALAPVDNPAAALEQAEQRLALAQERSQALIGR
EQTLAERQDTARATLDGQRAAWEQALAQSPFADEAQYLAALLDEDARNQLLALKARLEKA
CTEAQALEASARQSLAELQATPQTELALVELDEQLQALQLQRRELAQRQGELRGQLSGDE
QRRQNQQALFAEIAAQEGACDLWQRLNGLIGSADGAKYRRFAQGLTLDHLIHLANQQLER
LHGRYQLRRRALGELELEVVDTWQADVARDCRTLSGGESFLVSLALALALSDLVSHKTSI
DSLFLDEGFGTLDGETLEVALDALDALNASGKMIGVISHVEALKERIPVQLKVHKGVGMG
YSRLEPRFAVP
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgccgctcccatcccccggcggcttctgcatgaaaatcctcagcctgcgcctgaagaac
ctcaactccctcaagggcgagtggaagatcgacttcaccggcgagcccttcgccggcaac
ggcctgttcgccatcaccggcccaaccggtgccggcaagaccacgctgctggacgccatc
tgcctggccctctaccaccgcaccccgcgcatgagcagcgtctcggccacggtcaacgag
ctgatgacccgccacaccgccgactgcctggccgaggtggaattcgaggtgaagggcgtg
ggctaccgtgccttctggagccagcgccgcgcccgcgacaaggtcgatggcggcctgcag
gcgcccaaggtggagctggcgcgcatcaccgacggcgagattctcaccgacaagatcaac
gacaagctcaagcagaccgaaagcctcaccgggctggatttcgagcgcttcaccaaatcc
atgctgctggcccagggcgggttcgccgccttcctcgaagccagcgccaatcagcgtgcc
gagctgctggaggagctgaccggcaccgaggtgtacgggctgatctccgagcgcgtctac
cagcgcacccgggaggccgaggccagcctgggccagctgcgtgcacgggctgagggcgtg
gagctgctcaacgcggagcagcgccagcaactgcaaaacgaactcgccgaactcaatggc
cgtgaaagcagcctgcacggccagcaggagagcctgcagcgccagcgccagtggcgtgag
gccctggctggcgccgaggcgcgccagctcgccgcggtgcagcaggggcaggacgcccgg
caggcgctggagcaggccgggccgcaactgcagcgcctggccgagagcgagccggccgag
cgcctgcgcccgccgcaccgtgactggcagcgcgccgggcaggccgctaccgaagcggcc
gaggccctggcccaggtgcgtgaacagaaggcccaggccgcccgcgaggtggccgatggc
ctgtggcaggcgcggggctacagccagcagcggctggcggcactcgccgcccgccgcgat
gggctggccgagcaacggggccagattgaggcgctgctggcggccaacccgcaacacggc
ctgctgggcgagcgcctgggcgcctggcgggaacagctcggtgcgcgccgacacctggcg
caggccatcgcccagtcgctagcccgccagcagcaggaacggcaggacgccgagcagctg
gcgcagcgcatcgccggcttccaggcggcattggtggaaagcgatcagcacctggagcag
gcccgtgccgccgaagccctgcgccaggctgccttggccacactgctggccggtgattcc
gaaaccgccctgcgcgagcgctggcagcgcctcagcgaccagggccaccaactcgcccgc
ctgcagcaactggcggaaaaccgcacacgcctggaacagcagctggccgctgcgcaggac
ggaatcgaggccgacagccaggcacaggcgcagaagatcgcgacgcgagacgccctgcgc
ctgcagttcaccgacctcaagcaacagatccaggacaaggaaaagctgctggagcaggag
cagcgcatcctcaagctggaggcccatcgcgccgctttgcagcccggcgaggcctgcccg
ctgtgcggttcccacgaacacccggccatcgcggcctatggcgcgctggatgtctcggag
acccaggccgcgttgcaggccaagcgcgccgagcaggagcaggtgcgcgaacggggggcg
gccctgaacaccgagctggccgcgctggacgcgcacctgcgccagcgccagcaggacgag
cagcgcctgcaggatgaattgcaacagttgcaggcgcagtggcagcagcactgcaccgcc
ctgggccagccactggtcgatggcccggcggtggcggcggcccaggcgcagcagcaggcg
gacctcgccgccctgcaacgcagcctgggtgagctggacggcctcaagcaggccgtggac
gccgcccgtgggcagcgcgagcaagcccagaagcaccagcaggatgccatgcagcagcat
gcgctggcggtgcaggaacaaggcgccttgcgccgccgcgaagcggagaacaccgagcaa
ctgggccagctccaggcgcagcaggttcgccaggagtcggagctgggcgcggccttgggc
gagctcggttacgccctgccggaagacaacgagcgttggctggacgcgcgcgacgccgag
tggcgcacctggcgtgatgcccaggccctgcagcagcgcctggagcgtgacgagcagctg
ctgctggccgagctgcaaaccgccgaaggtgccgccacgcgctggcagcagcgttggggc
gagctggcgcagcccgatgttgaagccctagcccctgtggataaccccgccgccgccctg
gagcaggccgagcagcgcctggcgctggcccaggaacgcagccaggcgctgatcgggcgc
gagcagaccctggccgaacggcaggacaccgcccgcgccacgctcgacgggcaacgggcc
gcctgggaacaggcgctggcgcagagccccttcgccgacgaggcgcagtacctcgccgcg
ctgctggacgaggacgcacgcaaccagttgctggccctcaaggcccgcctggaaaaggcc
tgtaccgaagcccaggccctggaagcctcagcccggcagagcctggcggaattgcaggcg
acgccacagaccgagctggccctggtggagctggacgagcagctgcaggcgctgcaactg
caacgacgcgaactggcccagcgccagggcgagctgcgcgggcaactgagcggcgacgag
cagcgccggcagaaccagcaggcgctgttcgccgaaatcgccgcccaggaaggcgcctgc
gacctctggcagcgcctcaacggcttgatcggctcggccgacggcgccaagtaccgccgc
ttcgcccaggggctgaccctggatcacctgatccacctggccaaccagcagctggagcgc
ctgcacggccgctaccagctgcgccgtcgcgccctgggcgagctggagctggaagtggtg
gacacctggcaggccgatgtcgcccgggactgccgcaccctgtccggcggcgagagcttc
ctggtcagcctggcgctggccctggcgctttccgacttggtcagccacaagaccagcatc
gattcgctgttcctcgacgagggcttcggcaccctcgacggcgaaaccctggaagtggcc
ctcgacgccctggatgcgctcaatgccagcggcaagatgatcggcgtgatcagccacgtc
gaagcgctcaaggagcgcatcccggtgcagctcaaggtgcacaagggcgtgggcatgggc
tacagccgcctggagccgcgcttcgccgtcccataa
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