Pseudomonas solani: PSm6_09610
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Entry
PSm6_09610 CDS
T09213
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_09610 (sbcD)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PSm6_09610 (sbcD)
Archaeal homologous recombinant proteins
PSm6_09610 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
BCD84554
LinkDB
All DBs
Position
complement(1015705..1016925)
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AA seq
406 aa
AA seq
DB search
MRILHSSDWHLGQHFMGKTRQAEHQAFCAWLLERVQEHRVDAVLVAGDVFDTGAPPSYAR
EQYNRFVIELRDAGAQLVVLGGNHDSPAMLGESQGLLAALGTRVVPGVAADPQEQVLVLR
GPDGAPGAVLCAIPFVRARDVLQSQAGQSAADKQLSLQQAIQAHYAQLFELAERRRDELG
GGLPIIATGHLTTVGASASESVREIYVGALEAFPTSAFPPAAYIALGHIHRPQKVGGLEH
IRYSGSPIPLSFDEAGQAKEVLLVELDGEGVRSVTPLPVPCFQPLASVRGSLGELGGAIA
EQARRGTPERPVWLEVQVGTDDYLSDLQGRVAALCEGLPVEVLRLRRERAGLAPGLVGEA
RETLDELSAEDVFARRLELEQLDEDQARRLRDLHRGVLEEVRSERS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcctgcacagctccgactggcatctcggccagcacttcatgggtaagacccgc
caggccgaacaccaggccttctgcgcctggctgctggagcgggtgcaggaacaccgggtg
gacgcggtgctggtggcgggcgatgtgttcgacaccggtgcgccgccgagctacgcccgc
gagcagtacaaccgcttcgtcatcgagctgcgcgacgccggtgcgcaactggtggtgctg
ggtggcaaccatgattcgcccgccatgctcggcgagagccagggcctgctggcggccctg
ggcacccgcgtggtgccgggtgtcgccgccgacccgcaagagcaggtgctggtgctgcgc
ggccctgatggcgcgccgggcgcggtgctctgtgccatccccttcgtgcgcgcccgtgac
gtgctgcagagccaggccgggcagagcgcggcggacaagcagctgtccctgcagcaggcc
atccaggcccattacgcgcagctgttcgaactggccgagcggcgccgggacgaactgggg
ggcgggctgccgattatcgccaccggccacctgaccacggtcggcgccagtgccagcgag
tcggtgcgggaaatctatgtcggcgcgctggaggccttccccaccagcgccttcccgcct
gccgcctacatcgccctcggacatatccacaggccgcagaaggtcggcggcctggagcac
atccgctacagcggctcgcccatcccgttgtccttcgacgaagccggccaggccaaggaa
gtgctgctggtggagctggacggggagggcgtgcgcagcgtcacgcccttgccggtgccc
tgtttccagcccctggccagcgtgcgtggctccctgggcgaactgggcggcgccattgcc
gagcaggcccgccggggcacgcccgagcgccccgtatggctggaagtgcaggtgggcacc
gacgattacctgagcgacctgcagggccgcgtcgccgccctgtgcgaaggcttgccggtg
gaggtgctgcgcctgcgccgcgaacgcgccggcctcgcgcccggcctggtgggggaggcc
cgggagaccctggacgaactgagtgccgaggacgtgttcgcgcgccgcctggagctggag
caactggacgaggaccaggctcggcgcctgcgggacctgcaccgtggcgtgctggaagag
gtccgcagcgagcgcagctga
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