Pseudomonas solani: PSm6_09790
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Entry
PSm6_09790 CDS
T09213
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
psoa
Pseudomonas solani
Pathway
psoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSm6_09790 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoa03019
]
PSm6_09790 (rhlB)
Enzymes [BR:
psoa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PSm6_09790 (rhlB)
Messenger RNA biogenesis [BR:
psoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PSm6_09790 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
BCD84572
LinkDB
All DBs
Position
1039213..1040706
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AA seq
497 aa
AA seq
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MTVLKALKKIFGKGEEPISGVAPTAPATQAPTRTASERPPAQPKKAPRAPAEKPAAAVAA
TATEQAPRAEKKPRSDKPRSDKPRRERAPKPVDTWKLEDFVVEPMEGKTRFHDFKLSPTL
MHAIHDLGFPYCTPIQAGVLGFTLKGQDAIGRAQTGTGKTAAFLISIITQLQQTPPPKER
YMGEPRALIIAPTRELVVQIAKDAQALTKYTGLNVMSFVGGMDFDKQLKQLESRFCDILV
ATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPHKGERQTLLFSA
TFTDDVMNLAKQWTVDPAIVEIEPENVASETVEQHVYAVAGSDKYKLLYNLVAQNNWERV
MVFANRKDEVRRIEERLTKDGISAAQMSGDVPQHKRIKTLEGFREGKIRVLVATDVAGRG
IHVDAISHVINFTLPEDPDDYVHRIGRTGRAGTSGTSISFAGEDDAFALPPIEELLGRKI
NCETPPAELLKSVPRKH
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgctcaaagcactcaagaaaatctttggcaagggcgaagagcccatttccggc
gtcgccccgactgccccggccacccaggccccgactcgcaccgctagcgagagacccccc
gcccagcccaagaaggcgccgcgcgccccggctgagaaacccgccgccgctgttgccgcc
accgctaccgagcaggccccccgcgccgagaagaaaccccgcagcgacaaacccaggtcc
gacaagccccgccgtgagcgtgcgcccaagccggtagacacctggaagctggaagacttc
gtcgtcgaacccatggaaggcaagacccgcttccatgacttcaagctgtcgccgaccctg
atgcacgccatccatgacctgggcttcccctactgcacgccgatccaggcgggcgtactg
ggcttcaccctcaagggccaggacgccatcggccgcgcccagaccggcaccggcaagacc
gccgccttcctcatctcgatcatcacccagctgcagcagaccccgccgccgaaagagcgc
tacatgggcgagccccgtgcgctgatcatcgcgccgacccgcgagctggtggtgcagatc
gccaaggacgcccaggccctgaccaagtacaccggcctgaacgtcatgagcttcgtcggc
ggcatggacttcgacaagcagctcaagcagctggaatcgcgcttctgcgacatcctcgtg
gccactcccggccgcctgctggacttcaaccagcgcggtgacgtgcacctggacatggtc
gaagtgatggtgctggacgaagccgaccgcatgctcgacatgggcttcatcccccaggtc
cgccagatcatccgccagaccccgcacaagggcgaacgccagaccctgctgttctccgcc
accttcaccgacgacgtgatgaacctggccaagcagtggaccgtcgacccggccatcgtc
gagatcgagccggagaacgtcgccagcgagaccgtcgagcagcacgtctacgccgttgcc
ggcagcgacaagtacaagctgctctacaacctcgtcgcccagaacaactgggaacgggtg
atggtcttcgccaaccgcaaggacgaggtgcgccgcatcgaggaacgcctgaccaaggac
ggcatcagcgccgcccagatgtccggcgacgtgccccagcacaagcgcatcaagaccctg
gaaggcttccgcgaaggcaagatccgcgtactggtcgccaccgacgtcgccggccgtggc
atccacgtcgacgccatcagccacgtaatcaacttcaccctgccggaagacccggacgac
tacgtgcaccgcatcggccgtaccggccgtgccggcaccagcggaacctccatcagcttc
gccggcgaggacgatgccttcgccctgccgccgatcgaagaactgctgggccgcaagatc
aactgcgaaaccccgcccgccgagctgctcaagtcggtgccgcgcaagcactga
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