KEGG   Pseudomonas solani Sm006: PSm6_10170
Entry
PSm6_10170        CDS       T09213                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa  Pseudomonas solani Sm006
Pathway
psoa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSm6_10170
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoa03021]
    PSm6_10170
Transcription machinery [BR:psoa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSm6_10170
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_IclR PhyR_sigma-like HTH_23 HTH_40 HTH_7 Xre-like-HTH GerE HTH_11 HTH_28 HTH_Tnp_ISL3 HTH_36 HTH_AsnC-type Sigma70_r3 HTH_10 TnsD DUF2774
Other DBs
NCBI-ProteinID: BCD84610
UniProt: A0ABN6BQ43
LinkDB
Position
1078968..1079477
AA seq 169 aa
MTSSQAAPEQALHKLYSDHNGWLRNWLQRKLGCPQSAADLAQDTFLKVLLGREAHRILEP
RAFLTTIAKRVLANHYRRQDIERAYLQALAALPEEEVPSEETRAIILETLMELDRLLDGL
APLAKKVFLLAQVDGCTYNEIAEQLGLSLSSVKRYMAKAAERCYFAECL
NT seq 510 nt   +upstreamnt  +downstreamnt
ttgaccagcagccaggccgcccccgagcaggcgttgcacaagctctacagcgaccacaac
ggctggctccggaattggctgcagcgcaagctcggctgcccgcagagcgccgccgacctg
gcccaggacaccttcctcaaggtgctgctggggcgcgaggcgcaccgcattctcgaaccg
cgcgccttcctcaccaccatcgccaagcgcgtgctggccaaccactaccgccgccaggac
atcgagcgcgcctacctgcaggccctcgccgcgctgccggaagaggaagtgcccagcgag
gaaacccgcgccatcatcctggaaaccctgatggagctggaccgcctgctcgacggcctg
gcccctctggcgaaaaaggtcttcctgctggcccaggtggacggctgcacctacaacgag
atcgccgagcagctcggcctctccctttccagcgtcaagcgctacatggccaaggccgct
gagcgctgctacttcgcggagtgcctctga

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