Pseudomonas solani: PSm6_11290
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Entry
PSm6_11290 CDS
T09213
Name
(GenBank) hypothetical protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_11290
Enzymes [BR:
psoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PSm6_11290
DNA repair and recombination proteins [BR:
psoa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PSm6_11290
Prokaryotic type
PSm6_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
FAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
BCD84722
LinkDB
All DBs
Position
1192627..1193643
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AA seq
338 aa
AA seq
DB search
MAAGPTLALYLLSPSQWQEHDDAPAKVDFWLRNLASLQAELARLNVPLLIRRADLWDEAP
EAVARLCHEHQVSAVHVNEEYGINESQRDAAVKARLQADGLRLRSHLDQLLFKPGSVLTK
SDSYFQVFSQFRKACYARLHSALPHSAPLPKKQEPLDIESSAVPATVKGFHTPPASLQAL
WPAGEEEAGRRLEAFADQQIEHYQDERDFPAHPGTSQLSPYLAAGVLSPRQCLHAALRSN
QGEFESGNAGAVTWINELLWREFYKHILVGYPRVSRHRAFRADTEALRWRDAPKTWKPGN
RGVPASPSSTRRCANCWPPAGCTTACAWWWPCSSPRTC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgggccgaccctggccctctacctgctcagccccagccagtggcaggaacac
gacgacgcccccgccaaggtggacttctggctgcgcaacctggcctcgctgcaggccgag
ttggcgcgcctcaacgtgccgctgctgatccgccgcgccgacctctgggacgaagccccc
gaagccgtcgcccgcctgtgccacgagcaccaggtcagcgccgtgcacgtcaacgaggag
tacggcatcaacgagagccagcgcgatgccgccgtcaaggcacgcctgcaggccgacggc
ctgcgcctgcgcagccatctcgaccaactgctgttcaagccgggcagcgtgctgaccaag
agcgacagctacttccaggtcttcagccagttccgcaaggcctgctacgcgcggctgcac
agcgccctgccccacagtgcgccgctgccgaaaaagcaggagccgctggatatcgaaagc
agcgccgtacccgccacggtgaagggtttccacaccccacccgccagcctgcaagcgctc
tggcccgccggcgaagaggaagcgggccgccgcctggaggcgttcgccgaccagcagatc
gagcactaccaggacgaacgcgacttccccgcacaccccggcaccagccagctgtcgccc
tacctcgccgccggcgtgctgtcgccacggcaatgcctgcatgccgcgctgcgcagcaac
cagggcgagttcgagtcgggcaacgccggcgccgtcacctggatcaacgaactgctctgg
cgcgagttctacaagcacatcctcgtgggctacccacgcgtcagccgccaccgcgccttc
cgcgccgacaccgaagcgctgcgctggcgcgatgccccgaagacctggaagcctggcaac
aggggcgtaccggcatccccatcgtcgacgcggcgatgcgccaattgctggccaccggct
ggatgcacaaccgcctgcgcatggtggtggccatgttcctcaccaagaacctgctga
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