Pseudomonas solani: PSm6_12600
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Entry
PSm6_12600 CDS
T09213
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
psoa
Pseudomonas solani
Pathway
psoa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PSm6_12600 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psoa03019
]
PSm6_12600 (pnp)
03016 Transfer RNA biogenesis [BR:
psoa03016
]
PSm6_12600 (pnp)
Enzymes [BR:
psoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
PSm6_12600 (pnp)
Messenger RNA biogenesis [BR:
psoa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PSm6_12600 (pnp)
Transfer RNA biogenesis [BR:
psoa03016
]
Prokaryotic type
tRNA degradation factors
PSm6_12600 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
BCD84853
LinkDB
All DBs
Position
complement(1330430..1332538)
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AA seq
702 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTMDQDVTVLVTVVGAKQADPGKGFFPLS
VHYQEKTYAAGRIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFLNEVQVICTVVST
NKKTDPDVAAMIGTSAALAISGIPFAGPIGAARVAYHESTGYLLNPNYEQLKASSLDMVV
AGTQDAVLMVESEAQELTEDQMLGGVLFAHQEFQAVINAVKEFAAEAGKPTWNWTAPVEN
TALLGAIKAEFGEAISQAYTITIKQDRYNRLGELRDQVVARFAGEEAGQFPAGEVKDAFG
LLEYRTVRENIVNGKPRIDGRDTRTVRPLKIEVGVLDKTHGSALFTRGETQALVVATLGT
ARDAQLLDTLEGERKDGFMLHYNFPPFSVGECGRMGSAGRREIGHGRLARRGVSAMLPKS
DEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGDKFAVL
TDILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALEQALEARLNILGQMN
QIIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRSICEETKASIDIEDDGSVKIF
GETKEAAEAARQRVLGITAEAEIGKVYVGKVERIVDFGAFVNILPGKDGLVHISQISDKR
IDKVTDVLQEGQEVKVLVLDVDNRGRIKLSMKDVDAAEASGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaattccagttcggtcagtcgaccgtaaccctcgagactggc
cgtatcgcccgtcaagcttccggtgccgttctggtcaccatggaccaagacgtcaccgta
ctggtgaccgtggtcggcgccaagcaagccgacccgggcaagggcttcttcccgctgtcc
gtccactaccaggaaaaaacctacgcagccggccgcatccccggtggtttcttcaagcgt
gaaggccgtccttccgagaaagagaccctgacctcgcgcctgatcgaccgtccgatccgc
ccgctgttcccggaaggtttcctcaacgaagtgcaggtcatctgcaccgtggtctccacc
aacaagaagaccgatccggacgtcgccgcgatgatcggtacttccgctgccctggccatc
tccggcattcccttcgccggcccgatcggtgccgctcgcgtggcctaccacgagagcact
ggctacctgctgaacccgaactacgagcagctcaaggcttccagcctggacatggtcgtt
gccggtacccaggacgccgtgctgatggttgagtccgaagcccaggaactgaccgaagac
cagatgctcggtggcgtgctgttcgcccaccaggaattccaggccgtgatcaacgccgtc
aaggaattcgctgccgaagccggcaagccgacctggaactggaccgctccggtcgagaac
accgctctgctcggcgccatcaaggccgagttcggcgaggccatctcccaggcctacacc
atcaccatcaagcaagaccgctacaaccgcctcggcgagctgcgtgaccaggtcgtcgcc
cgcttcgctggcgaagaagccggtcaattcccggccggtgaagtcaaggacgccttcggc
ctcctggaataccgcaccgtgcgcgagaacatcgtcaacggcaaaccgcgtatcgacggc
cgcgacacccgcaccgtacgtccgctgaagatcgaagtcggcgtgctcgacaagacccac
ggttccgccctgttcacccgtggcgaaacccaggctctggtcgttgccaccctcggtacc
gcccgtgatgcccagctgctggacaccctggaaggcgagcgcaaagacggcttcatgctg
cactacaacttcccgcccttctcggtgggcgagtgcggccgtatgggcagcgccggccgt
cgcgagatcggccacggtcgcctggcccgtcgtggcgtttccgccatgctgccgaagagc
gatgagttcccctacaccatccgtgtagtgtcggaaatcaccgagtccaacggctccagc
tccatggcttccgtctgcggcgcctccctggccctgatggacgctggcgtgccgatgaag
gcaccggtcgctggtatcgccatgggtctggtcaaggaaggtgacaagttcgccgttctg
accgacatcctcggtgacgaagaccacctgggcgacatggacttcaaggtagccggtacc
gccaaaggcgtaaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatc
atggagatcgccctggagcaggcactggaagcacgcctgaacatcctcggtcagatgaac
cagatcatcggtcagtcccgtaccgagctgtcggccaacgctccgaccatgatcgcgatg
aagatcgacaccgacaagatccgtgacgtcatcggcaagggcggcgccaccatccgctcc
atctgcgaagagaccaaggcttccatcgacatcgaagacgatggcagcgtgaagatcttc
ggcgaaaccaaggaagctgccgaggctgcgcgtcagcgcgtactgggcatcaccgcggaa
gccgaaatcggcaaggtctacgttggcaaggtcgagcgcatcgtcgacttcggcgccttc
gtcaacatcctcccgggcaaagacggcctggtgcacatctcgcagatcagcgacaagcgc
atcgacaaggtcaccgacgtcctgcaggaaggccaggaagtgaaggtactggtgctggac
gtggacaaccgcggccgcatcaagctgtccatgaaagacgtggacgcagctgaggcttcg
ggcgtttga
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