Pseudomonas solani: PSm6_12620
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Entry
PSm6_12620 CDS
T09213
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
psoa03016
]
PSm6_12620 (truB)
Enzymes [BR:
psoa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PSm6_12620 (truB)
Transfer RNA biogenesis [BR:
psoa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PSm6_12620 (truB)
Prokaryotic type
PSm6_12620 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
PUA_3
Motif
Other DBs
NCBI-ProteinID:
BCD84855
LinkDB
All DBs
Position
complement(1333064..1333981)
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGILILDKPRGMSSNQALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDADKGYETLAQLGVTTTTGDAEGEIIERREVTVGRADIEARLDDFRGEIK
QIPPMYSALKKDGQPLYKLARAGEVVEREARSVTIARLELLAFESAQARLAVACSKGTYI
RTLVEDLGQVLGCGAHVAELRRTQAGPFVLAQAITLEALEKAHAEGGNEALDQFLLPEDS
GLEHWPLIQLSEHSAYYWLHGQPVRAPEAPKFGMLRVQDHNGRFIGIGEVSDDGRVAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggcccaggtgaaacgcatccgccgcaacgtcagcggcattctgatcctcgacaagcct
cgcggcatgagttccaaccaggccctgcagaaggtgcgctggttgctcaatgccgagaag
gccggccacaccggcagcctcgatcccctggccactggcgtgctgccgctgtgcttcggc
gaggcgaccaagttctcccagtacctgctggatgccgacaagggctacgagaccctggcg
cagctgggcgttaccactaccacgggcgatgccgagggcgagattatcgagcgccgtgag
gtgaccgtcggtcgtgccgatatcgaagcgcgtctcgacgacttccgtggcgaaatcaag
cagataccgcccatgtactcggccctgaagaaagacgggcagccgctgtacaagctggcg
cgtgcgggcgaggtagtggagcgcgaagcgcgttctgttactattgcgcgcctggaattg
ctggccttcgagtccgcccaggcgaggctcgccgtggcctgcagcaaaggcacctacatt
cgcacgctggtcgaagacctcgggcaggtgctgggttgcggggctcacgtggcggaactg
cgccgcactcaggcaggccccttcgtcctggcccaggcgatcaccctggaagcgctggaa
aaggcccatgccgaaggtggcaacgaggcgctggaccagttcctgttgccggaagacagc
ggcctggaacattggcccctcatccagttgagcgaacacagtgcctactactggttgcat
ggccaaccggtaagggctcccgaagcgccgaagttcggcatgctgcgggtgcaggatcac
aacggtcgcttcatcggtatcggtgaagtgagcgatgacgggcgcgtagcgccgcgtcga
ctgattcggtcggaatga
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