Pseudomonas solani Sm006: PSm6_17880
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Entry
PSm6_17880 CDS
T09213
Name
(GenBank) LysR family transcriptional regulator
KO
K13928
LysR family transcriptional regulator, malonate utilization transcriptional regulator
Organism
psoa
Pseudomonas solani Sm006
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoa03000
]
PSm6_17880
Transcription factors [BR:
psoa03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PSm6_17880
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
BCD85381
UniProt:
A0ABM7L763
LinkDB
All DBs
Position
1934209..1935126
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AA seq
305 aa
AA seq
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MQIDDELTLKKLQTFLAFMRSGNLSRAAAELNTSNVSVHRAIHSLESALRCPLFKHEGRN
LTPLESAFVLEERAQKLVQDVLETVRLTREAAGFSAERFKLGSLYSLTVKTVPQLIMGLK
LRRSELNIDLILGSNVDLFYKLKNMELDAILVSLDEGVSDGDCEQLPLFSDDIFLAVPTD
SPFAGQPEVDLADLADSTFITLTQGFATHRDGGRVFQQAGFEPKVAMQVNDIFTLLSMVS
SGVGYALLPGRIAAVYENRVKLIPLQARYRLQQHIGVVFLKAKERDPNLLALLAECRMYS
LARGG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcgacgacgaactcaccctgaagaagctgcagacctttctcgccttcatgcgt
agcggcaacctctcccgcgcagcggccgagctgaacaccagcaacgtcagcgtgcaccgc
gccatccactccctggagagcgccctgcgctgcccgctgttcaagcacgaggggcgcaac
ctgacaccgctggagagcgccttcgtgctggaggagcgtgcgcagaagctggtgcaggac
gtgctcgagacggtgcgcctgacccgtgaagcggcaggcttctcggccgagcgcttcaag
ctcggctcgctctattcgctgacggtgaagacggtgccgcagttgatcatgggcctgaag
ctgcggcgcagcgagctgaacatcgacctgatcctcggctccaacgtcgatcttttctac
aagctgaagaacatggagctggacgccattctggtgtccctcgacgagggcgtgagcgat
ggcgattgcgagcagctgccgctgttctccgacgacatcttcctcgccgtgcccaccgac
tcgcccttcgccggccagcccgaagtggacctggcggacctggccgactccaccttcatc
accctgacccagggcttcgccacccaccgcgacggcggccgggtgttccagcaggcgggc
ttcgagccgaaggtggcgatgcaggtgaacgacatcttcaccctgctcagcatggtcagc
tccggggtcggctacgccctgctgcccgggcgcatcgccgcggtgtacgagaaccgcgtg
aagctcatcccgctgcaggcgcgctaccgcctgcagcagcacataggcgtggtcttcctc
aaggccaaggagcgcgacccgaacctgctggcgctgctggccgaatgccggatgtacagc
ctggcgcgcgggggttga
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