Pseudomonas solani: PSm6_19480
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Entry
PSm6_19480 CDS
T09213
Name
(GenBank) RpiR family transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoa03000
]
PSm6_19480
Transcription factors [BR:
psoa03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSm6_19480
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
BCD85541
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Position
complement(2172443..2173309)
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AA seq
288 aa
AA seq
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MNLLQHIAQSRHLLRKSELKVADHVLLDPAAVMHSSMADLAQSVGVSEPTIVRFCRAIGC
GGFQDLKLKLAQSLAAGASFGQFAIHEDDSVADFSLKIFDTTLHTLMDVREKLDPQALQR
AIAACAQAQRVEFYGFGASGAVAADAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPSDVAI
CISQSGRSKDLLITANLVREAGATLITLCPSQTPLADLATVNLAIDVQEDTEIYTPLTSR
IAHLVVIDVLAMGVAMARGPTLVNHLKSVKRSLRSLRLSPKSIKVMED
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
gtgaatctgctgcaacacatcgcccagtcgcgccacctgctgcgcaagtcggaactgaaa
gtcgccgaccacgtcctgctcgatcccgccgcagtcatgcacagctccatggccgacctg
gcgcagagcgtcggggtcagcgagcccaccatcgtgcgcttctgtcgcgccatcggttgc
ggcggcttccaggatctcaagctcaagctggcgcagagcctggccgccggtgccagcttc
ggccagttcgcgatccacgaggatgattcggtcgccgacttcagcctgaagatcttcgac
accacgctgcacaccctgatggacgtgcgcgagaagctcgacccccaggccctgcagcgc
gccatcgccgcctgcgcccaggcccagcgcgtggagttctacggcttcggtgcctccggc
gcggtggccgccgatgcccagcacaagttcttccgcctgctgctcaccgccgccgcctat
tccgacccgcacatgcaggcgatgtcggcggtgacgctgaagccgtcggacgtggccatc
tgcatttcccagtccggccgctccaaggacctgctgatcaccgccaacctggtgcgcgag
gccggtgccacgctgatcaccctgtgcccgagccagacgccgctggcggacctggccacg
gtgaacctggccatcgacgtgcaggaagacaccgagatctacaccccgctgacctcgcgc
atcgcccacctggtggtgatcgacgtgttggcgatgggcgtggccatggcccgtggcccg
accctggtcaaccacctcaagagcgtgaagcgcagcttgcgcagcctgcgtctgtcgccc
aagtcgatcaaggtgatggaagactga
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