KEGG   Pseudomonas solani: PSm6_22240
Entry
PSm6_22240        CDS       T09213                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
psoa  Pseudomonas solani
Pathway
psoa00300  Lysine biosynthesis
psoa00470  D-Amino acid metabolism
psoa01100  Metabolic pathways
psoa01110  Biosynthesis of secondary metabolites
psoa01120  Microbial metabolism in diverse environments
psoa01230  Biosynthesis of amino acids
Module
psoa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    PSm6_22240 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PSm6_22240 (dapF)
Enzymes [BR:psoa01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     PSm6_22240 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: BCD85817
LinkDB
Position
complement(2458252..2459082)
AA seq 276 aa
MLLRFTKMHGLGNDFMVLDLVSQHAHIQPKHAKQWGDRNTGIGFDQLLIVEAPTNPDVDF
RYRIFNSDGSEVEQCGNGARCFARFVLDKRLTVKKQIRVETKSGIIELDVRADGQVRVDM
GPPRLAPQQIPFVAEGEALNYSVEVEGRPIELAALSMGNPHAVLRVEDIDKAPVHELGPK
IEHHSRFPQRVNVGFLQVIDRNQARLRVWERGAGETQACGTGACAAAVAAIRQGWMDSPV
QLELPGGKLSIEWAGPDQSVMMTGPAVRVYEGQVRL
NT seq 831 nt   +upstreamnt  +downstreamnt
atgctgctgcgtttcaccaagatgcacggcctgggcaacgacttcatggtcctcgacctg
gtcagccagcacgcgcacatccagcccaagcacgccaagcaatggggcgatcgcaacacc
ggcatcggcttcgaccagttgctgatagtggaggcgccgaccaacccggacgtcgacttc
cgctaccgcatcttcaactccgacggctccgaggtcgaacagtgcggcaacggcgcgcgc
tgcttcgcccgcttcgtgctggacaagcgcctgacggtgaagaagcagatccgcgtcgag
accaagagcggcatcatcgagctggacgtccgcgccgacggccaggtccgcgtcgacatg
ggcccgccacgcctggcgccccagcagattcccttcgtcgccgaaggcgaggcgctgaac
tacagcgtcgaggtcgaaggccgcccgatcgaactggccgccctgtccatgggcaacccc
catgcggtgctgcgcgtcgaggacatcgacaaggcgccggtccacgagctgggcccgaag
atcgaacaccactcgcgcttcccgcaacgggtcaacgtcggcttcctccaggtgatcgac
cgcaaccaggcgcgcctgcgcgtgtgggagcgtggcgccggggaaacccaggcctgcggt
accggtgcctgcgccgccgccgtggccgccatccgccagggctggatggactctcccgtg
caactggagctgccgggtggcaagctgtccatcgaatgggccggccccgaccagtccgtg
atgatgaccggacccgccgtgcgcgtgtatgaagggcaggtccgcctatga

DBGET integrated database retrieval system