Pseudomonas solani: PSm6_25370
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Entry
PSm6_25370 CDS
T09213
Symbol
glyA1_1
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00260
Glycine, serine and threonine metabolism
psoa00460
Cyanoamino acid metabolism
psoa00630
Glyoxylate and dicarboxylate metabolism
psoa00670
One carbon pool by folate
psoa00680
Methane metabolism
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
psoa01120
Microbial metabolism in diverse environments
psoa01200
Carbon metabolism
psoa01230
Biosynthesis of amino acids
psoa01240
Biosynthesis of cofactors
psoa04981
Folate transport and metabolism
Module
psoa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSm6_25370 (glyA1_1)
09102 Energy metabolism
00680 Methane metabolism
PSm6_25370 (glyA1_1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSm6_25370 (glyA1_1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSm6_25370 (glyA1_1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSm6_25370 (glyA1_1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSm6_25370 (glyA1_1)
Enzymes [BR:
psoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSm6_25370 (glyA1_1)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCD86130
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All DBs
Position
2791390..2792643
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AA seq
417 aa
AA seq
DB search
MFSKHDQIQGYDDELFSAMQEEEQRQEDHIELIASENYTSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEYVDKVEQLAIDRAKELFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTRTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPSPLPYADVVTTTTHKTLRGPRGGLI
LARKNEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKTYQAQVIKNAQAMAQ
VFIERGFDVVSGGTDNHLFLLSLIKQGLTGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GVRIGTPAITTRGFKEPQSIELAGWICDILDHLGDADVEAQVAKQVAALCADFPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccagatccagggctacgacgacgaactcttcagtgcgatgcag
gaagaagaacagcgccaggaagaccacatcgagctgatcgcctccgagaactacaccagc
cagcgggtgatggaagcccagggcagcggcctgaccaacaagtacgccgagggctacccg
ggcaagcgctactacggtggctgcgaatacgtcgacaaggtcgagcagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccgcactccggctcttcc
gccaactccgccgtctacctggccctgctcaatgccggcgacaccatcctcggcatgagc
ctggcccacggtggccacctcacccacggcgccaaggtgtcgtcctccggcaagctctac
aacgccgtgcagtacggcctcgacacccgcaccgggctgatcgactacgacgaagtcgag
cgcctggccgtggagcacaagccgaagatgatcgtcgccggcttctccgcctattcgaaa
accctcgacttcccgcgcttccgcgccatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgctgccggtctctaccccagcccgctgccctac
gccgacgtggtcactaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctcgcccgcaagaacgaggagatcgagaagaagctcaattccgccgtgttccccggcgcc
cagggcggcccgctgatgcacgtgatcgccggcaaggcggtgtgcttcaaggaagcgctg
gagcccggcttcaagacctaccaggcccaggtgatcaagaacgcccaggccatggcccag
gtgttcatcgagcgcggcttcgacgtggtttccggcggcaccgacaaccacctgttcctg
ctctcgctgatcaagcagggcctgaccggcaaggacgccgacgccgccctcggccgcgcc
ggcatcaccgtgaacaagaacgccgtgcccaacgacccgcaatcgcccttcgtcacctcg
ggcgtgcgcatcggcaccccggccattactactcgtggcttcaaggagccgcagagcatc
gagctggccggctggatctgcgacatcctcgaccacctcggtgatgccgatgtcgaggcc
caggtggccaaacaggtcgcggccctctgcgccgatttccccgtgtaccgctga
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