KEGG   Pseudomonas solani: PSm6_26280
Entry
PSm6_26280        CDS       T09213                                 
Symbol
hsdR
Name
(GenBank) type I restriction-modification system deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
psoa  Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:psoa02048]
    PSm6_26280 (hsdR)
Enzymes [BR:psoa01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PSm6_26280 (hsdR)
Prokaryotic defense system [BR:psoa02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PSm6_26280 (hsdR)
SSDB
Motif
Pfam: EcoEI_R_C ResIII SWI2_SNF2 DEAD Helicase_C HSDR_N DUF4145 AAA_19 AAA_11 THOC7 SLFN-g3_helicase AAA_34 SNF2-rel_dom DUF6432 UvrD-helicase ArsA_HSP20 Sec8_N
Other DBs
NCBI-ProteinID: BCD86221
LinkDB
Position
complement(2893167..2896640)
AA seq 1157 aa
MEASSNFAFLQEHDPLFLQLASTAEQVFAADPNTTLIKLRQLGEALAQDLASRAGIEFDA
NTTQADLLYKLSREIQLDQNICSLFRTLRVEGNKATHEFRTRHREAMDGLKVARALAIWY
HQSFSKNARTFKPGPFVTPSDPSAPLRDLQSQIEQLKAQLDESTQQLESNQQLAELHKRE
AEEYAVLAEQMDAESRGHKQLAAEHEAALRELRSEHEQRIKALQIQLLTQPQAAQQVMHC
TMHATSSFDLNEDLTRILIDQQLIDAGWEADSLDLTYSKGARPEKGKNKAIAEWPTSSAK
ACADYVLFAGLTPIAIVEAKRKRINIADRIPQAERYAREFNLAAEHQLPWLQAGQAQPWS
DGQGGHFRVPFAFACNGRPYIKQLAEQSGTWFRDLRSPANTRRPLPDFHTPNDLLDLLKR
SQAEAEAKLKTEGFSYLKLRDYQEKAIQAVEQALANNQRDCLLAMATGTGKTRTIIGLMY
RFLKAERFKRILFLVDRSALGQQAIDSFNDTTLEQNHTLAQIYDIKELGDMAAEAETRIQ
VATVQAMVSRIFRSDNPPPVGEFDCVIVDEAHRGYTLDQEMTEGELAVRDHSQYLSQYRR
VLDHFDACRIGLTATPAKHTSEIFGKPVFTYSYREAVADDWLVDHEPPIRYETQLSKHGI
RFEKGESVSVINTQTGEVDVAELEDELTFNIESFNRRVITPAFDKVICDELAKELDPFGE
EKTMIFCVNQAHAERVKNLLDDAFKQAYSEQYNEAAVRIITGQSDKVEQLIRRYKNEPTP
NIAITVDLLTTGIDVPKICNLVFMRRVRSRILYEQMKGRATRRCDDIGKTVFRIYDPVDL
YASLEAVDTMKPLVKNPNISLEQLVSELTSGVSHDAPGSHDDSSHAHDVLNQLSQRVMRI
LRKAQHKAQDKPTLKKKLDELKEVWGVEPAQLHKHLHDLGPQQAANFVRQHSQLLNQLAS
VSALLGSENYPVISTHSDELLVREQNYGYNQKPADYLESFNDFIRSQLNQSAALGVVVNR
PKDLTREQLREVRLLLDQHGFSEASLKSAWRNQTNQEIAASIIGYIRQAAIGEALLPFDQ
RVTMAMQKIYALQPWTPVQRKWLDRLAKQLVHEVVIDPQQVNDAFRNDGGLKALDRNLGG
NLDQVLEALNDNLWSAA
NT seq 3474 nt   +upstreamnt  +downstreamnt
atggaagccagtagtaacttcgcttttcttcaggaacacgacccgctattcctgcaacta
gccagcaccgctgaacaagtattcgccgccgatcccaacaccacactgatcaagctgcgc
cagttgggagaagcattggcccaagatctggctagccgcgccggtatcgagttcgacgcc
aacaccacgcaggccgatctactctacaaactcagccgcgaaatccagctggatcagaac
atctgcagccttttccgtactctgcgcgtcgaaggcaacaaggccacccacgaattccgt
acccggcaccgcgaggccatggatgggctaaaggtagcccgcgctctggccatctggtat
caccagtccttcagcaagaacgcccgcaccttcaaacccggccccttcgtcaccccgagc
gaccccagcgctccgctacgcgaccttcagagccagatcgaacaactcaaggcgcaattg
gacgaatccacacagcagttggaaagcaaccaacagctggcagagctgcataagcgtgaa
gccgaggaatacgccgtactcgccgaacaaatggacgccgaatcgcgcggccataagcaa
ctggcggctgaacatgaagccgccctgcgcgagctacgcagtgaacacgagcaacgcatc
aaagccctgcagatacagctgttgactcagccgcaagctgcgcagcaggtcatgcactgc
accatgcacgcgaccagcagctttgatctgaatgaagacctcacccgcatattgatcgac
cagcagttgatcgacgccggctgggaagccgactctctcgacctcacttacagcaagggc
gcacgccccgagaagggtaagaacaaagccatcgccgaatggcccaccagcagcgccaag
gcttgcgccgactacgtactattcgctggtctcacgccaatcgccatcgttgaggccaag
cgcaagcgcatcaacatcgccgaccgcatcccccaggccgagcgctatgcccgcgagttc
aacctcgccgccgagcatcagttgccctggctacaggccggtcaagcgcagccctggagc
gacggccagggtggccacttccgcgtgccctttgccttcgcctgcaacggcaggccctac
atcaaacagcttgccgaacagtcaggtacttggttccgtgatctacgcagcccagccaac
actcgccggccactgccagacttccacaccccgaatgatctgcttgatctgctcaaacgc
agccaggcagaggccgaagccaagctcaagaccgaaggcttctcctacctcaagctgcgc
gactaccaagagaaagccatccaggccgtagagcaggccctggccaacaatcagcgtgac
tgcctgctggccatggccaccggcaccggtaaaacccgcaccatcattggcctgatgtac
cgattcctgaaagccgagcgcttcaagcgcatcctctttctggttgatcgcagcgccctc
ggccagcaggccatcgactcgttcaacgacacaacgcttgagcaaaaccacaccctggca
cagatctacgacataaaagagctgggtgacatggctgccgaagcggaaacccgcattcaa
gtggccaccgtgcaggctatggtcagccgcattttccgctcggacaacccgccgcccgtg
ggcgaattcgactgcgtcatcgtggacgaagcccaccggggttacacccttgatcaggag
atgaccgagggcgagttggccgtgcgcgatcacagtcagtacctctcgcaataccgccgc
gttctcgaccacttcgatgcctgccgcatcggtctgacagccaccccggccaagcacacc
agcgaaatcttcggcaaaccggtattcacctatagctaccgcgaggccgtagcggacgac
tggctggtggatcacgaaccgccgatccgctacgaaacccagctcagcaagcacggcatc
cgcttcgagaaaggcgagtcggtcagcgtcatcaacacccaaaccggcgaagtcgacgta
gctgagctggaagatgagctcaccttcaacatcgaatcgttcaaccgccgcgtgatcacc
ccggccttcgacaaagtcatctgcgatgagctggccaaggagctggacccctttggcgaa
gagaagaccatgatcttctgtgtcaatcaggcccacgccgaacgggtcaaaaacctgctc
gacgatgcattcaaacaggcctacagcgagcaatacaacgaagctgccgtgcgcatcatc
accggtcagagtgacaaggttgagcaactgattcgccgctacaagaacgagcccaccccc
aatatcgccatcaccgtcgacctgctcaccacaggtatcgacgtaccgaaaatctgcaac
ctggtgtttatgcgccgagtgcgctctcgcatcctctacgagcagatgaaaggccgcgcc
acccgccgctgcgacgacattggcaaaaccgtattccgcatctacgaccccgtcgatctc
tacgccagcctggaagcggtcgacaccatgaagcccctggtgaagaaccccaacatcagc
ctggaacaactggtcagcgaactcaccagcggagtcagccatgacgcacccggtagccac
gacgacagcagccacgcccatgacgtgctcaaccaactgagccaacgtgtcatgcgtatc
ctgcgcaaggctcagcacaaggcccaggacaaacccacgctcaagaaaaagctcgatgag
ctgaaagaagtgtggggcgttgaaccggcccagttacataaacacctgcacgaccttgga
ccgcagcaagccgccaactttgtccgccaacacagccaactgctcaaccagctcgcctcc
gtcagtgccctgctcggttcggagaactacccggttatctccacccacagcgacgaactg
ctggtacgcgagcagaactacggatacaaccagaaaccagctgactacttggaaagcttc
aacgactttattcgcagccaactcaaccagtcagcggcccttggcgttgtggtcaaccgc
cccaaggatctgacccgcgagcaattgcgcgaagtccgcctactactcgaccagcacggc
ttcagcgaagccagcctgaaaagcgcctggcgcaatcagaccaaccaggaaatcgccgcc
agcatcattggctatatccgccaagccgccatcggcgaagccctgttgccctttgaccaa
cgcgtgaccatggctatgcagaaaatctacgcactgcagccctggacgcccgtacagcgc
aaatggctggatcgcctggccaagcaactggtgcatgaagtggtcatcgacccgcagcag
gtcaacgatgcattccgtaacgatggcggcctcaaggcgctggatcgcaacctgggcggc
aacctggatcaggtactggaagccctgaatgacaacctatggtcggcggcgtga

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