Pseudomonas solani Sm006: PSm6_27460
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Entry
PSm6_27460 CDS
T09213
Symbol
foxI_1
Name
(GenBank) ECF sigma factor FoxI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa
Pseudomonas solani Sm006
Pathway
psoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSm6_27460 (foxI_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoa03021
]
PSm6_27460 (foxI_1)
Transcription machinery [BR:
psoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSm6_27460 (foxI_1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
PhyR_sigma-like
HTH_29
HTH_23
HTH_24
GerE
FliT
Motif
Other DBs
NCBI-ProteinID:
BCD86339
UniProt:
A0ABM7L9Z8
LinkDB
All DBs
Position
complement(3020909..3021478)
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AA seq
189 aa
AA seq
DB search
MQIPSRIKKMRLIFICYRFFGDPMSSPHLSVQRLYSDHHGWLKNWLRGRLGNAADAADLA
QDTFLRLLARREQLEIATPRAFLRTVARGLVIDHWRREELERAYLESLAHLPEAQTPSLE
EREQILELLERIARMLDGLKPKVRTAFLLAQCEGLTHVQVAERMGISLRSVERHVADALF
HCYQLRFAE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaatcccttcgcgcatcaagaaaatgcgattaattttcatttgctaccgattcttc
ggtgaccccatgtcgtctccccatctcagtgtgcaacgcctctacagcgaccatcacggc
tggctgaagaactggctgcgcggccgcctcggcaacgccgccgatgccgccgacctggcc
caggacaccttcctgcgcctgctcgcccgccgcgagcagctggagatcgccacgccgcgc
gccttcctgcgcaccgtcgcgcgggggctggtgatcgaccactggcgccgcgaggaactg
gagcgggcctacctggaatccctcgcccacctgccggaggcgcagacgccgagcctggag
gaacgcgagcagatcctcgagttgctggaacgcatcgcgcgcatgctcgatggcctgaag
ccgaaggtgcgcaccgccttcctgttggcccagtgcgaggggctgacccatgtgcaggtg
gccgagcgcatgggcatctccctgcgttcggtggagcgccatgtcgccgacgccctgttc
cattgctaccagctgcgcttcgccgaatga
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