Pseudomonas solani: PSm6_28610
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Entry
PSm6_28610 CDS
T09213
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00900
Terpenoid backbone biosynthesis
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PSm6_28610 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
psoa01006
]
PSm6_28610 (ispA)
Enzymes [BR:
psoa01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PSm6_28610 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PSm6_28610 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
PSm6_28610 (ispA)
Prenyltransferases [BR:
psoa01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PSm6_28610 (ispA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
BCD86454
LinkDB
All DBs
Position
complement(3142492..3143379)
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AA seq
295 aa
AA seq
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MIAAYQSRCQARVDAALETLFDAPRPELQRLYEAMRYSVTNGGKRVRPLLVYAACEALGG
DLDRADGAACAVELIHAYSLVHDDLPAMDDDDLRRGKPTTHKAFDEACAILAGDGLQTLA
FEVLADRRLNPQNSDARLAMVGTLARAAGPAGMVGGQAIDLGSVGLRLDQKALEVMHRHK
TGALIEASVRLGALASGNADDSSMKSLQAYAQAIGLAFQVQDDILDVESDTVTLGKTQGK
DQASDKPTYPALLGLDDAKAYALELRDMALHTLRPFSEAAEPLRDLARYIVERRS
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcggcctaccagtcccgctgccaggcgcgcgtcgacgccgccctggaaaccctg
ttcgacgccccccgccctgaactgcaacgcctgtacgaggccatgcgctacagcgtcacc
aatggcggcaagcgcgtgcgcccgctgctggtgtatgcggcctgcgaagccctgggtggc
gatctcgaccgtgccgacggcgccgcctgtgcggtggagctgatccacgcctattccctg
gtccacgacgacctgccggccatggacgacgacgacctgcgccggggcaagcccaccacc
cacaaggccttcgacgaagcctgcgccatcctcgccggcgacggcctgcagaccctggcc
ttcgaagtgctggcggaccgtcgcctcaacccgcagaacagcgatgcgcgcctggccatg
gtcggcaccctggcccgtgccgccggccccgccggcatggtcggcggccaggccatcgac
ctcggctcggtgggcctgcggctcgaccagaaggccctggaagtgatgcaccggcacaag
accggcgccctgatcgaagccagtgtgcgccttggcgccctggccagtggcaatgccgac
gattcatcgatgaagtccttgcaggcctatgcccaggccatcggcctggccttccaggtg
caggacgacatcctcgacgtcgagagcgacaccgtcaccctcggcaagacccagggcaag
gaccaggccagcgacaagcccacctaccccgccctgctcggcctcgacgacgccaaggcc
tacgccctggaactgcgcgacatggccctgcacaccctgcgccccttcagcgaggccgcc
gaaccgctgcgcgacctggcccgctacatcgtcgaacggcgcagctga
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