Pseudomonas solani: PSm6_29420
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Entry
PSm6_29420 CDS
T09213
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
psoa
Pseudomonas solani
Pathway
psoa03030
DNA replication
psoa03430
Mismatch repair
psoa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PSm6_29420 (holA)
03430 Mismatch repair
PSm6_29420 (holA)
03440 Homologous recombination
PSm6_29420 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psoa03032
]
PSm6_29420 (holA)
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_29420 (holA)
Enzymes [BR:
psoa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PSm6_29420 (holA)
DNA replication proteins [BR:
psoa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PSm6_29420 (holA)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PSm6_29420 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delt_C
DNA_pol3_delta_C
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
BCD86535
LinkDB
All DBs
Position
complement(3228523..3229560)
Genome browser
AA seq
345 aa
AA seq
DB search
MKLNAAQLSKHLQGTLAPVYVVSGDEPLLCQEACDAIRMACRERDFNERQVFNVETSFDW
GQLHEAGASLSLFADRRLLELRIPNGKPGDKGAAALLEYLSRPPEDTLLLVSLPKLDGST
QKTKWAKALIDGPNAQFLQIWPVDAHQLPQWIRQRLAQAGLAANQEAVDLIAARVEGNLL
AAAQEIEKLKLLAEGGQIDAATVQAAVADSARFDVFGLIDAALNGEAAHTLRTLEGLRGE
GVETPVILWALARELRQLAGIAQQYSQGVPLEKAFASARPPVWDKRRPLVSRALQRHPAS
RWNQLLSDAQRIDAQIKGQAAGDPWIGLAHLALSLAGQRLPIPAA
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgccgcccaactcagcaagcacctgcaaggcaccctcgcccctgtctac
gtcgtcagtggcgacgagccgctgctgtgccaggaagcctgcgacgccatccgcatggcc
tgccgcgagcgcgacttcaacgagcgccaggtcttcaacgtcgagaccagcttcgactgg
ggccaactgcatgaggccggtgccagcctctcgctgttcgccgacaggcgcctgctcgaa
ctgcgcatccccaacggcaagccgggggacaaaggcgccgccgccctgctcgaatacctc
tcgcgcccgccggaagacaccctgctgctggtgagcctgcccaagctggacggcagcacc
cagaagaccaaatgggccaaggcgctgatcgacggccccaacgcccagttcctgcagatc
tggccggtggacgcccaccagctgccgcaatggatacgccagcgcctggcccaggccggc
ctcgccgccaaccaggaagcggtggacctgatcgccgcccgcgtggaaggcaacctgctg
gccgccgcccaggaaatcgaaaagctcaagctgctcgccgaaggcggccagatcgacgcc
gccaccgtgcaggccgccgttgccgacagcgcccgcttcgacgtcttcggcctgatcgat
gccgcactcaatggcgaagccgcccacaccctgcgcaccctcgaaggcctgcgtggcgag
ggcgtggaaaccccggtgatcctctgggccctggcccgcgagctgcgccagctggccggt
atcgcccagcagtacagccagggcgtaccactggaaaaggccttcgcctccgcccgcccg
ccggtctgggacaaacgccgcccgctggtcagtcgtgccctgcaacgccaccctgcctcg
cgctggaaccaactgctcagcgatgcccagcgcatcgacgcgcagatcaagggccaggcc
gcaggcgacccctggatcggcctcgcgcacctcgcgctcagccttgccggccagcgcctg
cccatccccgccgcctga
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