Pseudomonas solani: PSm6_30890
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Entry
PSm6_30890 CDS
T09213
Symbol
rtcR
Name
(GenBank) transcriptional regulator
KO
K14414
transcriptional regulatory protein RtcR
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoa03000
]
PSm6_30890 (rtcR)
Transcription factors [BR:
psoa03000
]
Prokaryotic type
Other transcription factors
Others
PSm6_30890 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
NACHT
AAA_30
MCM
AAA_7
AAA_19
AAA_2
AAA_33
AAA_14
ATPase_2
TniB
IstB_IS21
ABC_tran
T2SSE
ResIII
Motif
Other DBs
NCBI-ProteinID:
BCD86682
LinkDB
All DBs
Position
3386778..3388382
Genome browser
AA seq
534 aa
AA seq
DB search
MARKTVAIGFIGATLDRMGKGAERWNKWRPSVGLCQQPDLLLDRLELIHGSDARDLGLAQ
RIKGDVEQVSPQTEVVLHEMPLHNPWDFEEVYAALHDFASAYRFDTEREDYLVHITTGTH
VAQICWFLLTEARYLPARLVQTSPARRRDEDRHAIGTHSLIDLDLSRYDHIASRFQREML
ESLALLKSGIATRNAAFNRSIEQIERVALRSRAPMLLVGPTGAGKSFLARRIFELKDARH
QIKGRFVEVNCATLRGDGAMSALFGHIKGAFTGAQNARDGLLRAADGGMLFLDEIGELGL
DEQAMLLKAIEEKRFFPMGSDREVESDFLLIAGTHRDLRTRVTEGLFREDLYARINLWTF
ELPGLAGRREDIEPNIDFELERHAREQGRMVRFNVEARRRYLAFACSGEARWAGNFRELS
ASITRMATLADSGRIDEVLVQEEIDRLRYAWGAQGQADDGLAALLGERVVELDRFDRLQL
AAVVAVCREASSLSEAGRLLYDVSRQAKAQPNDADRLRKYLARFGLEWKDLAAG
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgcaagaccgtcgccatcggctttatcggcgccaccctggaccgcatgggcaag
ggcgccgagcgctggaacaagtggcgccccagcgtcggcctgtgccagcagccggatctg
ctgctggaccgcctggagctgatccacggcagcgatgcccgcgacctagggctggcccag
cgcatcaagggcgatgtggagcaggtgtcgccgcagaccgaggtggtgctgcacgagatg
ccgctgcacaacccctgggacttcgaggaggtgtatgcggcgctgcacgacttcgccagt
gcctaccgcttcgataccgagcgcgaggactacctggtgcacatcaccaccgggacccac
gtagcgcagatctgctggttcctgctcaccgaggcgcgttacctgccggcgcgcctggtg
cagacctcgccggcccgccgccgcgacgaggatcgccacgccatcggtacccactcgctg
atcgacctcgacctgtcgcgctacgaccatatcgcctcgcgctttcagcgcgagatgctg
gagagcctggcgctgctgaagtccggcatcgccacgcgcaacgcggcgttcaaccgcagc
atcgagcagatcgagcgggtggcgctgcgttcccgcgcgcccatgctgctggtggggccg
accggggcgggcaagtcgttcctggcgcggcgcatcttcgagctgaaggatgcgcgccac
cagatcaagggccgcttcgtcgaggtgaactgcgcgaccctgcgcggcgacggcgcgatg
tcggcgctgttcggccatatcaagggcgccttcaccggcgcgcagaacgcccgcgatggc
ctgctgcgcgcggcggacggcggcatgctgttcctcgacgagatcggcgagctgggcctc
gacgagcaggccatgttgctcaaggccatcgaggagaagcgcttcttccccatgggctcg
gaccgtgaggtggaaagcgatttcctgctgatcgccggcacccaccgcgacctgcgcacg
cgggtgaccgaggggctgttccgcgaagacctctatgcccgtatcaacctctggaccttc
gaactgccgggcctggccgggcgccgcgaggacatcgagccgaacatcgatttcgaactg
gaacgccacgcccgcgagcaggggcgcatggtgcgcttcaacgtcgaggcgcggcgccgc
tacctggccttcgcctgttcgggggaagcgcgctgggcgggcaacttccgcgagctgtcg
gcctcgatcacgcgcatggcgaccctggccgacagcggccgcatcgacgaggtgttggtg
caggaggagatcgaccgcctgcgctacgcctggggcgcccaggggcaggcggatgatggc
ctggcggcgctgctcggcgagcgggtggtggagctggaccgcttcgaccgcctgcagctg
gcggcggtggtcgcggtgtgccgcgaggcgagcagcctgtccgaggcggggcggctgctc
tatgacgtctcgcgccaggccaaggcgcagcccaatgatgccgaccggctgcgcaagtac
ctggcgcggttcggcctggagtggaaggacctggccgccgggtag
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