Pseudomonas solani: PSm6_33210
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Entry
PSm6_33210 CDS
T09213
Symbol
bifA
Name
(GenBank) GGDEF-domain containing protein
KO
K21024
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
psoa
Pseudomonas solani
Pathway
psoa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSm6_33210 (bifA)
Enzymes [BR:
psoa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
PSm6_33210 (bifA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
dnstrm_HI1420
FtsL
Motif
Other DBs
NCBI-ProteinID:
BCD86914
LinkDB
All DBs
Position
complement(3633490..3635556)
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AA seq
688 aa
AA seq
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MKLDLKHSLSLKLLRVVLLSALVVGVVLSCAQIVFDVYKTRQAVANDAHRILGMFRDPST
QAVYSLDREMGMQVIEGLFQHESVRFAAIGHPNEPMLAEKSRPLMELPTRWLTDAILGKE
QNFTTQLVGRGPYSEYYGDLNITLDTAPYGEDFVVSSVIIFVSGVLRALAMGLVLYSVYH
WLLTKPLSKIIEHLTNINPDRPSEHKLPMLKGNEKNELGLWINTANELLASIERNTHLRR
EAENSLLRMAQYDFLTGLPNRQQLQQQLDQILDDAGRLQRRVAVLCVGLDDFKGVNEQFS
YQTGDQLLIALADRLRGHSGRLGALARLGGDQFALVQADIEQPYEAAELAQSVLDDLEAP
FALEQQEVRLRATIGITLFPEDGDSTEKLLQKAEQTMTLAKSRSRNRYQFYIASVDSEMR
RRRELEKDLREALNRNELHLVYQPQVDYRDHRVVGVEALLRWQHPQHGFVPPDLFIPLAE
QNGMIIPIGEWVLDQACRQLREWHDQGFSELRMAINLSTVQLHHAELPRVVNNLLQVYRL
PPRSLEVEVTETGLMEDISTAAQHLLSLRRSGALIAIDDFGTGYSSLSYLKSLPLDKIKI
DKSFVQDVLEDEDDATIVRAIIQLARSLGMQVIAEGVETQEQEAYIISQGCNEGQGYLYS
KPLPARELTGYLKQARRLTNAASNPATL
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
ttgaagctggatctcaaacacagcttgtcactgaagttgctccgcgtggtgctcctgtcc
gcgctggtggtcggtgtagtgctgagctgcgcgcagattgtgttcgacgtctacaagact
cggcaggcggtggccaacgatgcccaccgcatcctcggcatgttccgcgatccctcgacc
caggccgtctacagcctcgatcgggagatgggcatgcaggtgatcgagggcctgttccag
cacgagtcggtccgcttcgccgccatcggccaccccaacgagcccatgctcgccgagaag
tcgcgcccgctgatggagctgccgacccgctggctcaccgatgccatcctcggcaaggaa
cagaacttcaccacccagctggtgggccgcggcccgtacagcgagtactacggcgacctc
aacatcaccctggacaccgcgccctacggcgaggacttcgtcgtcagctcagtgatcatt
ttcgtctccggggtgctgcgcgccctggccatgggcctggtgctctactcggtctaccac
tggctgctgaccaagccgctgtcgaagatcatcgagcacctcaccaatatcaatcccgac
cgccccagcgagcacaagctgcccatgctcaagggcaacgagaagaacgaactggggttg
tggataaacaccgccaacgagctgctggcctccatcgagcgcaatacccacctgcgccgg
gaggcggagaacagcctgctgcgcatggcccagtacgacttcctcaccgggctgcccaac
cgccagcaactgcagcagcagctggaccagatcctcgatgacgccggccgcctgcagcgc
cgcgtcgccgtgctctgcgtcggcctggacgacttcaagggcgtcaacgaacagttcagc
taccagaccggcgaccagttgctgatcgccctcgccgaccgcctgcgtggccacagcggc
cgcctcggcgccctggcccgcctgggtggcgaccagttcgccctggtccaggccgatatc
gaacaaccctacgaagcggccgaactggcccagagcgtgctcgacgacctcgaggcgccc
ttcgccctggaacagcaggaagtgcgcctgcgcgccaccatcggcatcaccctgttcccg
gaagacggcgacagcaccgagaagctgctgcagaaagccgaacagaccatgaccctggcc
aagagccgctcgcgcaaccgctaccagttctacatcgccagcgtcgacagcgagatgcgt
cgtcggcgcgagctggagaaagacctgcgcgaagcactcaaccgcaacgaactgcacctg
gtctaccagccccaggtcgactaccgcgaccaccgcgtggtgggcgtcgaggcgctcctg
cgctggcagcacccgcagcacggcttcgtgccgccggacctgttcatccccctggccgaa
cagaacggcatgatcatccccatcggcgaatgggtgctggaccaggcctgccgccagctg
cgcgaatggcacgaccagggcttcagcgaactgcgcatggccatcaacctgtccaccgtg
caactgcaccacgccgagctgccacgggtggtgaacaacctgctgcaggtctaccgcctg
ccgccgcgcagcctggaagtggaagtcaccgagaccggcctgatggaggacatctccacc
gccgcccaacacctgctgagcctgcgccgctccggcgcgctgatcgcgatcgacgacttc
gggaccggctactcctccctgagctacctgaagagcctgccgctggacaagatcaagatc
gacaagagcttcgtccaggacgtgctcgaggacgaggacgacgccaccatcgtgcgcgcc
atcatccagctcgcccgcagcctgggcatgcaggtgatcgccgaaggcgtggagacccag
gagcaggaggcgtacatcatctcccagggctgcaacgagggacagggctacctctacagc
aaacccctccccgcccgcgaactcaccggctacctcaagcaggcccgccgcctgaccaac
gccgcctccaaccccgcgacgctctga
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