Pseudomonas solani: PSm6_34860
Help
Entry
PSm6_34860 CDS
T09213
Symbol
glyA1_2
Name
(GenBank) serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00260
Glycine, serine and threonine metabolism
psoa00460
Cyanoamino acid metabolism
psoa00630
Glyoxylate and dicarboxylate metabolism
psoa00670
One carbon pool by folate
psoa00680
Methane metabolism
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
psoa01120
Microbial metabolism in diverse environments
psoa01200
Carbon metabolism
psoa01230
Biosynthesis of amino acids
psoa01240
Biosynthesis of cofactors
psoa04981
Folate transport and metabolism
Module
psoa_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PSm6_34860 (glyA1_2)
09102 Energy metabolism
00680 Methane metabolism
PSm6_34860 (glyA1_2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PSm6_34860 (glyA1_2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PSm6_34860 (glyA1_2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PSm6_34860 (glyA1_2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PSm6_34860 (glyA1_2)
Enzymes [BR:
psoa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PSm6_34860 (glyA1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BCD87079
LinkDB
All DBs
Position
complement(3804998..3806254)
Genome browser
AA seq
418 aa
AA seq
DB search
MFSKHDQIQGYDDELFSAMQEEEQRQEDHIELIASENYTSQRVMEAQGSGLTNKYAEGYP
GKRYYGGCEYVDKVEQLAIDRAKELFGADYANVQPHSGSSANSAVYLALLNAGDTILGMS
LAHGGHLTHGAKVSSSGKLYNAVQYGLDTRTGLIDYDEVERLAVEHKPKMIVAGFSAYSK
TLDFPRFRAIADKVGALLFVDMAHVAGLVAAGLYPSPLPYADVVTTTTHKTLRGPRGGLI
LARRNEEIEKKLNSAVFPGAQGGPLMHVIAGKAVCFKEALEPGFKTYQAQVIKNAQAMAQ
VFIERGFDVVSGGTDNHLFLLSLIKQGLTGKDADAALGRAGITVNKNAVPNDPQSPFVTS
GVRIGTPAITTRGFKEPQSIELAGWICDILDHLGDADVEAQVAKQVAALCADFPVYRG
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttcagcaagcacgaccagatccagggctacgacgacgaactcttcagtgcgatgcag
gaagaagagcaacgccaggaagaccacatcgagctgatcgcctccgagaactacaccagc
cagcgggtgatggaagcccagggcagcggcctgaccaacaagtacgccgagggctacccg
ggcaagcgctactacggtggctgcgaatacgtcgacaaggtcgagcagctggccatcgac
cgcgccaaggagctgttcggcgccgactacgccaacgtccagccgcactccggctcttcc
gccaactccgccgtctacctggccctgctcaacgccggcgacaccatcctcggcatgagc
ctggcccatggcggccacctgacccacggcgccaaggtgtcgtcctccggcaagctctac
aacgccgtgcagtacggcctcgacacccgcaccgggctgatcgactacgacgaagtcgag
cgcctggccgtggaacacaagccgaagatgatcgtcgccggcttctccgcctattcgaag
actctcgacttcccgcgcttccgcgccatcgccgacaaggtcggggcgctgctgttcgtc
gacatggcccacgtcgccggcctggtcgctgccggcctgtaccccagcccgctgccctac
gccgacgtggtcaccaccaccacccacaagaccctgcgcggcccgcgcggcggcctgatc
ctcgcccgccggaacgaggagatcgagaagaagctcaactccgccgtgttccccggcgcc
cagggcggcccgctgatgcacgtcatcgccggcaaggcggtgtgcttcaaggaagcgctg
gagcccggcttcaagacctaccaggcccaggtgatcaagaacgcccaggccatggcccag
gtgttcatcgagcgcggtttcgacgtggtttccggcggcaccgacaaccacctgttcctg
ctgtcgctgatcaagcagggcctcaccggcaaggacgccgacgccgccctcggccgcgcc
ggcatcaccgtgaacaagaacgccgtgcccaacgacccgcaatcgcccttcgtcacctcc
ggcgtgcgcatcggcactccggccatcaccacccgtggcttcaaggagccgcagagcatc
gagctggccggctggatctgcgacatcctcgaccacctcggcgatgccgatgtcgaggcc
caggtggccaaacaggtcgcggccctctgcgccgatttccccgtgtaccgcggctga
DBGET
integrated database retrieval system
