Pseudomonas solani Sm006: PSm6_35810
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Entry
PSm6_35810 CDS
T09213
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psoa
Pseudomonas solani Sm006
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoa03021
]
PSm6_35810 (rapA)
Transcription machinery [BR:
psoa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PSm6_35810 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCD87174
UniProt:
A0ABN6BX65
LinkDB
All DBs
Position
complement(3894698..3897031)
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AA seq
777 aa
AA seq
DB search
MLLADEVGLGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDA
ERFLESDASNPFEDAQLALVSLEWLKGSEKAQDAAFAAGWDLLVVDEAHHLVWHPEQASD
EYRLVEQLAEVIPGVLLLTATPEQLGQDSHFARLRLLDPARFHDLEAFRAESANYKPIAE
AVQELLDQGRLSPGAHATISGFLGAEGEALLAAVTDGDSEAAARLVRELLDRHGTGRLLF
RNTRAAVQGFPERNLHPYPLPSPVEYMELPVGEHPDLYPEVSFQAQQESGDEAERWWRFD
PRVEWLIDTLKMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAA
YFADEEFGAQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIQL
HVPYLETSPQERLFQWYNQALNAFLATCPTGNALQHQFGPRLLPLLDGGDDEQWQALVDE
AEAERKRLEGELHAGRDRLLELNSGGTGEGQALVEAIHEQDDEFALPIYMEALFDAFGID
SEDHSENALVLKPGEKMLDAGFPLGDDEGVTITYDRNQALSREDMQFLTWEHPMVQGGMD
LVLSGSMGNTSVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANG
NDLASKVAFDTLNDQLESVPRGSANKFVQAQRDVLSAQIHAAEAKIRPRHEARVADAVKR
LTAELDEELARMIALKAVNPSVRDSEIDALRKQRDDGLALMEKAALRLEAIRVLVAG
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
gtgctgctggcggacgaagtgggcctgggcaagaccatcgaggccggcctggtgatccat
cgccagctgctctcgggccgcgccaaccgcgtgctgatcctggtgccggagaacctccag
caccagtggctggtggagatgcgccgccgcttcaacctgcaggtcgccctgttcgacgcc
gagcgcttcctcgagagcgacgccagcaaccccttcgaggacgcgcaactggcgctggtc
tccctggagtggctgaagggcagcgagaaggcccaggacgccgccttcgccgccggctgg
gacctgctggtggtggacgaagcccaccacctggtctggcacccggaacaggccagcgat
gaataccgcctggtggagcaactggccgaggtcatccccggcgtgctgctgctcaccgcc
acccccgaacaactgggccaggacagccacttcgcccgcctgcgcctgctcgacccggcg
cgcttccatgacctggaagccttccgcgccgaaagcgccaactacaagccgatcgccgaa
gcggtgcaggagctgctggaccagggccgcctgtcccccggcgcccacgccaccatctcc
ggcttcctcggtgccgagggcgaagccctgctggccgccgtcaccgatggcgacagcgaa
gccgctgcgcgcctggtgcgcgagctgctggaccgccacggcaccggccgcctgctgttc
cgtaatacccgcgccgccgtgcagggcttccccgagcgcaacctgcacccctacccgctg
ccgagccccgtggaatacatggagctgccggtgggcgagcaccccgacctgtacccggaa
gtcagcttccaggcgcagcaggaaagcggtgatgaagccgagcgctggtggcgcttcgac
ccccgcgtcgagtggctgatcgacaccctgaagatgctcaagaagttcaaggtgctggtg
atctgcgcccacgccgaaaccgccctggacctggaagacgccctgcgcgtgcgctccggc
atccccgccaccgtgttccacgaaggcatgagcattctcgagcgcgaccgcgcggcggcc
tacttcgccgacgaggagttcggcgcccaggtactgatctgctccgagatcggcagcgaa
ggccgcaacttccagttctcccatcacctggtgctgttcgacctgccggcccacccggac
ctgctggaacagcgcatcggccgtctcgaccgtatcggccagaagcacaccatccagctg
cacgtgccctacctggaaaccagcccgcaagagcgcctgttccagtggtacaaccaggcc
ctcaacgccttcctcgccacctgccccaccggcaacgccctgcagcaccagttcggcccg
cgcctgctgccgctgctggacggcggtgacgacgagcaatggcaggccctggtggacgag
gccgaagccgagcgcaagcgcctggaaggcgaactgcacgccggtcgcgaccgcctgctg
gaactcaactccggcggcaccggcgaaggccaggccctggtggaagccatccacgagcag
gacgacgagttcgccctgcccatctatatggaagcgctgttcgacgccttcggcatcgac
agcgaggaccactccgagaacgccctggtgctcaagccgggcgagaagatgctcgacgcc
ggcttccccctgggcgacgacgaaggcgtgaccatcacctacgaccgcaaccaggcgctg
tcccgcgaggacatgcagttcctcacctgggaacaccccatggtgcagggcggcatggac
ctggtgctgtccggctccatgggcaacacctcggtagcgctgatcaagaacaaggcgctg
aaacccggcaccgtgttgctggagctgctctacgtcagcgaagtggtggcaccccgctcc
ctgcagctgggccgctacctgccgccggccgccctgcgctgcctgctcgacgccaacggc
aacgacctggccagcaaggtggccttcgacaccctcaacgaccagttggaaagcgtgccg
cgcggcagtgccaacaagttcgtccaggcccagcgcgacgtgctctcggcccagatccac
gccgccgaagcgaagatccgcccgcgtcacgaagcccgcgtggccgatgcggtgaaacgc
ctgaccgccgagctggacgaggagctggcgcgcatgatcgccctcaaggccgtcaacccc
agcgtccgcgacagcgagatcgacgccctgcgcaagcagcgtgacgacggcctggcgctg
atggaaaaagccgccctgcgcctggaggcgatccgcgtgctggtagcgggttga
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