Pseudomonas solani: PSm6_35950
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Entry
PSm6_35950 CDS
T09213
Symbol
fadD2
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00061
Fatty acid biosynthesis
psoa00071
Fatty acid degradation
psoa01100
Metabolic pathways
psoa01212
Fatty acid metabolism
psoa02024
Quorum sensing
psoa04146
Peroxisome
Module
psoa_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PSm6_35950 (fadD2)
00071 Fatty acid degradation
PSm6_35950 (fadD2)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PSm6_35950 (fadD2)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PSm6_35950 (fadD2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
psoa01004
]
PSm6_35950 (fadD2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psoa04147
]
PSm6_35950 (fadD2)
Enzymes [BR:
psoa01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PSm6_35950 (fadD2)
Lipid biosynthesis proteins [BR:
psoa01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PSm6_35950 (fadD2)
Exosome [BR:
psoa04147
]
Exosomal proteins
Exosomal proteins of breast milk
PSm6_35950 (fadD2)
Exosomal proteins of breast cancer cells
PSm6_35950 (fadD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
DUF2486
Motif
Other DBs
NCBI-ProteinID:
BCD87188
UniProt:
A0ABM7LCB1
LinkDB
All DBs
Position
3907933..3909621
Genome browser
AA seq
562 aa
AA seq
DB search
MQPDFWSDKRPAGVPDQIDLTAYRSVIEVFERSCKKFADRPAFSNLGVTLTYAELDRLSG
AFAAYLQKHTDLKPGDRIAVQMPNVLQYPIAVFGALRAGLIVVNTNPLYTAREMRHQFKD
AGVRALVYVNLFGKLVQEVLPDTEIDYLIEARMGDMLPSLKGWLVNTVVKKVKKMVPDFH
LPQAVSFKAALKQGQGHALKPVKVSLDDIAVLQYTGGTTGVAKGAMLTHGNLVANMQQVD
ACLSQLGPDGQPLMKQGQEIMIAPLPLYHIYAFTANCMCMMVNGNHNVLITNPRDIPGFV
KELKKWRFSALLGLNTLFVALMDHPEFKDLDFSNLKVTNSGGTALVKATAERWQAMTGCS
VVEGYGLTETSPVASTNPYGTLARLGTVGIPVPGTAFKVIDDDGAELPLGERGELCIKGP
QVMKGYWQREEATAEVLDAEGWLKTGDIAVIDPDGYVRIVDRKKDLIIVSGFNVYPNEIE
DVVMAHPKVASCAAIGVPDDKSGEAVKLFVVAREGGLSVDELKAYCKANFTGYKVPKHIV
LKDALPMTPVGKILRRELRDIA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcaacctgatttctggagcgacaaacgccctgctggcgtacccgaccagatcgacctg
accgcctatcgctcggtgatcgaggtcttcgaacgttcctgcaagaaattcgccgaccga
ccggccttcagcaacctcggcgtcaccctgacctacgccgagctggaccgcctctccggc
gccttcgccgcctacctgcagaagcacaccgacctcaagcccggcgaccgcatcgcggtg
cagatgcccaacgtgctgcagtacccgatcgccgtgttcggcgccctgcgcgccgggctc
atcgtggtcaacaccaacccgctgtacaccgcccgcgagatgcgccaccagttcaaggac
gccggcgtgcgggcactggtctacgtcaacctgttcggcaagctggtgcaggaagtgctg
ccggacaccgaaatcgactacctgatcgaagcgcgcatgggtgacatgctgccgagcctc
aagggctggctggtcaacaccgtggtgaagaaggtcaagaagatggtccccgacttccac
ctgccccaggcggtgtccttcaaggccgcgctgaagcagggccagggccacgcgctgaaa
ccggtgaaggtgagcctggacgacatcgctgtgctgcagtacaccggcggcaccacgggc
gtggccaagggcgcgatgctcacccacggcaacctggtggccaacatgcagcaggtggat
gcctgcctgtcgcagctcggcccggacggccagccgctgatgaagcagggccaggagatc
atgatcgcgccgctgccgctctatcacatctatgccttcaccgcgaactgcatgtgcatg
atggtcaacggcaaccacaacgtgctgatcaccaacccgcgcgacatccccggcttcgtc
aaggagctgaagaaatggcgcttctccgcgctgctgggcctcaacaccctgttcgtcgcg
ctgatggaccaccccgagttcaaggacctggatttctccaacctcaaggtcaccaactcc
ggcggcaccgccctggtgaaggccaccgccgaacgctggcaggccatgaccggctgctcg
gtggtggagggctacggcctcactgaaacctccccggtggccagcaccaacccctatggc
accctggcgcgcctgggcaccgtgggcatcccggtaccgggcaccgccttcaaggtgatc
gatgacgacggcgccgagctgcccctgggcgagcgcggcgagctgtgcatcaagggcccg
caggtgatgaagggctactggcagcgcgaggaagccaccgccgaggtgctcgacgccgag
ggctggctgaagaccggcgacatcgcggtgatcgacccggacggctacgtgcgcatcgtc
gaccgcaagaaggacctgatcatcgtctccggcttcaacgtctatcccaacgagatcgag
gacgtggtcatggcccacccgaaggtggccagctgcgccgccatcggcgtgccggacgac
aagtccggcgaggcggtgaagctgttcgtcgtggcccgcgagggcggcctcagcgtcgac
gagctgaaggcctactgcaaagccaacttcaccggctacaaggtgcccaagcacatcgtc
ctcaaggacgccctgccgatgacgccggtcggcaagatcctccgtcgcgaactgcgcgac
atcgcctga
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