Pseudomonas solani: PSm6_38780
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Entry
PSm6_38780 CDS
T09213
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psoa01011
]
PSm6_38780
Enzymes [BR:
psoa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PSm6_38780
Peptidoglycan biosynthesis and degradation proteins [BR:
psoa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PSm6_38780
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
Cucumo_coat
TPR_19
ANAPC3
AAA_lid_9
Motif
Other DBs
NCBI-ProteinID:
BCD87471
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All DBs
Position
complement(4238583..4240511)
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AA seq
642 aa
AA seq
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MRGRLLSLFSCLLLTTVTLDAAQAVPLAQQRQMYDEAKRALAKGDSGPYKRYANALADYP
LEPYLAYDELTARLKWASNDEIEKFLAEHGDLPQANWMKLRWLRWLAERGEWKTFVNYYD
PKMNFTELDCLYGQYQIKNGPKAEGYKSAEKLWLVGKSQPEACDVLFDLWRAEGQMTEQM
RWRRAKLAAEARNYGLASFLVKGLPTLQTQGKLLLDVAQNPQMLSQTARFAPADKAMGDV
VGLGLRRLARQDPEKAMALLDGYAARMKFSSSEKVAIAREIGLTLAKRYDPRALKLMTQY
DPKLRDNTVSEWRARLLLRLGQWDDAYKLTKQMPAELANTNRWRYWQARSLQLAQPQSAE
AARLYQPLAKERDFYGFLAADRIQTPYQLNNKPLALDPRLVQKVRNTAGIRRALEFHDRG
QIVDGRREWYYVSRLFSRDEMVAQAKLAYDMQWYFPAIRTISQAQYWDDLDIRFPMAHRG
ALTQQARLRGLHSSWVFAITRQESAFMADARSGVGAMGLMQLMPGTAKETARKFGIPLAS
PQQALNPDVNIQLGAAYLSQVHGQFNGNRVLASAAYNAGPGRVRQWLKGANHLAFDVWVE
SIPFDETRQYVQNVLSYSVIYGQKLNAPQPLVDWHERFFDDQ
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgtctgctcagcctgttctcctgcctgcttctcaccaccgtcaccctcgat
gcagcccaagcggtcccccttgcccagcaacgtcagatgtacgacgaggccaagcgcgcc
ctggccaagggtgacagcggcccctacaagcgttacgccaatgccctggccgactacccg
ctggagccctacctggcctacgacgagctgaccgcccgcctgaagtgggccagcaacgac
gagatcgagaaattcctcgccgagcatggcgacctgccccaggccaactggatgaagctg
cgctggttgcgctggctggccgagcgcggcgaatggaagaccttcgtcaattactacgac
ccgaagatgaacttcaccgagctggactgcctctacggccagtaccagatcaagaacggc
cccaaggccgaaggctacaagagcgccgagaaactctggctggtgggcaagtcccagccc
gaggcctgtgacgtgctcttcgacctgtggcgtgccgaaggccagatgaccgagcagatg
cgctggcgccgcgccaagctcgccgccgaggcgcgcaactatggcctcgccagcttcctg
gtgaagggcctgccaacgcttcagacccagggcaagctgctgctggatgtcgcgcagaac
ccgcagatgctcagccagaccgcccgcttcgccccggccgacaaggccatgggcgatgtg
gtcggcctcggcctgcgccgcctggcccgccaggacccggaaaaggccatggccctgctg
gatggctacgccgcgcggatgaagttctccagcagcgagaaggtcgccatcgcccgcgag
atcggcctcaccctggccaagcgctacgaccctcgcgccctcaagctcatgacacagtac
gaccccaagctgcgcgacaacaccgtcagcgaatggcgcgcgcgcctgctgctgcgcctg
ggccagtgggacgacgcctacaagctgaccaagcagatgcccgccgagctggccaatacc
aaccgctggcgctactggcaggcccgctccctgcaactggcccagccgcagagcgccgaa
gccgcccgcctctaccagcccctggcaaaggagcgtgacttctacggcttcctcgccgcc
gaccgtatccagacgccctaccagctcaacaacaagccgctggccctggacccgcgcctg
gtgcagaaggtgcgcaatactgccggtatccgccgtgccctggagttccacgatcgcggc
cagatcgtcgacggtcgccgcgagtggtactacgtcagccgcctgttcagccgtgacgaa
atggtcgcccaggccaaactcgcctacgacatgcagtggtacttcccggccatccgcacc
atcagccaggcccagtactgggacgacctggacatccgcttccccatggcccaccgcggt
gccctgacccagcaggcacgcctgcgtggcctgcactccagctgggtgttcgccatcacc
cgccaggaaagtgccttcatggccgacgcccgctccggcgtcggtgccatgggcctgatg
caactgatgcccggcaccgccaaggagaccgcgcgcaagttcggcatccccctcgcctca
ccgcaacaggcgctcaatccggacgtcaacatccagctcggcgccgcctacctcagccag
gtgcacggccagttcaacggcaaccgcgtgctcgcctccgccgcctacaacgccggcccc
ggccgcgtacgccaatggctcaagggtgccaaccacctggccttcgacgtctgggtggaa
agcatccccttcgacgagacccgccagtacgtacagaacgtgctgtcctactccgtgatc
tacgggcagaagctcaacgccccgcagcccctggtggactggcacgagcgcttcttcgac
gaccagtga
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