Pseudomonas solani: PSm6_38840
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Entry
PSm6_38840 CDS
T09213
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00071
Fatty acid degradation
psoa00280
Valine, leucine and isoleucine degradation
psoa00310
Lysine degradation
psoa00362
Benzoate degradation
psoa00380
Tryptophan metabolism
psoa00410
beta-Alanine metabolism
psoa00640
Propanoate metabolism
psoa00650
Butanoate metabolism
psoa00907
Pinene, camphor and geraniol degradation
psoa00930
Caprolactam degradation
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
psoa01120
Microbial metabolism in diverse environments
psoa01200
Carbon metabolism
psoa01212
Fatty acid metabolism
Module
psoa_M00087
beta-Oxidation
psoa_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PSm6_38840 (fadB)
00650 Butanoate metabolism
PSm6_38840 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PSm6_38840 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PSm6_38840 (fadB)
00310 Lysine degradation
PSm6_38840 (fadB)
00380 Tryptophan metabolism
PSm6_38840 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PSm6_38840 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PSm6_38840 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PSm6_38840 (fadB)
00930 Caprolactam degradation
PSm6_38840 (fadB)
Enzymes [BR:
psoa01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PSm6_38840 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PSm6_38840 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PSm6_38840 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PSm6_38840 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
BCD87477
LinkDB
All DBs
Position
4245647..4247794
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALEGGIVELKFDLKGESVNKFNRLTLNELRQSVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPDEELVAGNLEANKIFSDFEDLQVPTVVAINGIALGGGLE
MCLAGDYRVMSETAKIGLPEVKLGIYPGFGGTVRLPRVIGTDNAIEWIASGKENKAADAL
KVGAVDAVVAPAKLQEAALDLVKRAISGELDFKAKRQPKLEKIKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKLAKTPVAASLIGLFLNDQEL
KKKAKQYDEVARDVKLAAVLGAGIMGGGIAYQSASKGTPILMKDIREEGIQMGLNEASKL
LGKRVEKGRMTPAKMAEALTAIRPTMSYGDFGAVDIVVEAVVENPKVKQIVLAEVEGVVR
EDAILASNTSTISISLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFSKLLGFGVDFVRIDKIMEKFGWPMGPAYL
SDVVGIDTGHHGRDVMAEGFPDRMAVEGKTAVDVMYEANRLGQKNGKGFYAYETDKRGKP
KKVSDPEAYELLKSIVVEQRELTDEDIINFMMIPLCLETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSVGVAEFVALADKYAELGALYHPTAKLREMAAKGQKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgagggcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaaattcaaccgtctaaccctgaatgaactg
cgtcagtcggttgatgccatcaaggccgatgcgtcggtcaagggcgttatcgtcagcagt
ggcaaggacgtgttcatcgtcggtgcggacatcaccgaattcgtcgacaacttcaagttg
cccgatgaagagctggtggcaggcaacctcgaagccaacaagatcttcagcgatttcgaa
gacctgcaggttccgaccgtggtcgccatcaatggcatcgccctcggtggcggcctggaa
atgtgcctggccggtgactaccgcgtcatgagcgagaccgccaagatcggcctgccggaa
gtcaagctgggtatctacccgggcttcggcggcaccgtgcgtctgccgcgtgtgatcggc
accgacaatgccatcgagtggatcgcctccggcaaggaaaacaaggctgccgacgccctg
aaagtgggtgccgtcgatgccgttgtcgctcctgcgaaactccaggaagccgctctggat
ctggtcaagcgcgccatctccggcgagctggacttcaaggccaagcgtcagcccaagctg
gaaaagatcaagctcaacgccatcgagcagatgatggccttcgaaaccgccaagggtttc
gtggctggccaggccggcccgaactacccggctccggtcgaagccatcaagaccatccag
aaagccgccaacttcggtcgtgacaaagcgcttgaagtcgaggccgccggcttcgtcaag
ctggccaagaccccggtcgcggcaagcctgatcggcctgttcctgaatgaccaggaactg
aagaagaaagccaagcagtacgacgaagtcgctcgcgacgtgaaactggctgccgtactc
ggcgctggcatcatgggtggcggtatcgcctaccagtcggcttccaaaggcactccgatc
ctgatgaaggatatccgtgaagagggtatccagatgggcctgaacgaggcctccaagctg
ctcggcaagcgcgtcgagaaaggccgcatgaccccggccaagatggctgaggccctgacc
gccattcgcccgaccatgtcctacggtgatttcggcgctgtcgacatcgtcgtcgaagcc
gtggtcgagaaccccaaggtcaagcagatcgtgctggccgaagtggaaggcgtggttcgt
gaggacgccatcctggcctccaacacctccaccatctccatcagcctgctggccaaggcg
ctgaagcgtcccgagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccc
ctagtcgaagtcatccgtggcgagaagtccagcgaagtggccgtggccaccaccgttgcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaacgactgccccggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttctccaagctgctgggcttcggcgtcgac
ttcgtgcgcatcgacaagatcatggagaaattcggctggcccatgggtccggcctacctc
tccgacgtagtcggcatcgacaccggccaccacggccgtgacgtcatggccgaaggcttc
ccggaccgcatggccgtggaaggcaagaccgccgtcgacgtgatgtacgaagccaatcgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtttccgatccggaagcctacgagctgctgaagtccatcgtcgttgagcagcgc
gagctgaccgacgaagacatcatcaacttcatgatgatcccgctgtgcctggaaaccgtt
cgttgcctggaagacggcatcgtcgagaccgcagctgaggccgacatgggcctgatctac
ggcatcggcttcccgcccttccgtggtggtgcactgcgttacatcgactccgtcggtgta
gccgaattcgttgccctggccgacaagtacgccgaactgggcgcgctgtaccacccgacc
gcgaagcttcgtgaaatggccgccaagggccagaagtttttcggttaa
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