KEGG   Pseudomonas solani: PSm6_42450
Entry
PSm6_42450        CDS       T09213                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
  KO
K02405  RNA polymerase sigma factor FliA
Organism
psoa  Pseudomonas solani
Pathway
psoa02020  Two-component system
psoa02025  Biofilm formation - Pseudomonas aeruginosa
psoa02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSm6_42450 (fliA)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    PSm6_42450 (fliA)
  09142 Cell motility
   02040 Flagellar assembly
    PSm6_42450 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoa03021]
    PSm6_42450 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:psoa02035]
    PSm6_42450 (fliA)
Transcription machinery [BR:psoa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSm6_42450 (fliA)
Bacterial motility proteins [BR:psoa02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    PSm6_42450 (fliA)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 HTH_30 UPF0122 GerE HTH_AsnC-type MarR_2 Rv2175c_wHTH Phage_terminase
Other DBs
NCBI-ProteinID: BCD87838
LinkDB
Position
4643357..4644079
AA seq 240 aa
MYNKAQARDSQHQLIERYAPLVKRIAYHLLGRLPANVQVEDLMQAGMIGLLEASKKYDSS
KGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRKIEARTGRDAKDQEVAA
ELGLSLEDYYGILSDTLGSRLFSFDDLLQDGEHGATHEDTGVTHLEPSNDLEDERFQAAL
ADAIANLPERERLVLALYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRSRLGEWRAH
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtacaacaaggcacaggctagggattcccagcaccagctgatcgagcgctacgcgccg
ctggtcaaacgcatcgcctaccacctgctgggccgcttgccggccaacgtgcaggtggag
gacctgatgcaggccggcatgatcggcctgctcgaagcctcgaagaaatacgattccagc
aagggcgcaagtttcgagacctatgcaggcatacgcatccgcggtgccatgctcgatgaa
gtgagaaaaggggattgggcaccacgctcggtccatcgcaacacccggatggtgagcgat
gccatccggaaaattgaggcaagaaccgggcgagacgctaaagatcaggaagttgcggcc
gaacttggattgagtctcgaagattactacggcatcctgagcgacactttgggcagccgc
ctgttcagcttcgacgacctgttgcaggacggtgaacatggcgcgacgcacgaagacacc
ggagtcacccatctcgaaccttcgaatgatctggaagacgagcgcttccaggcggcgctg
gctgacgccatcgccaatctgccggaacgagagcgcttggtactggcgctgtattacgac
gaagagctgaatttgaaggaaatcggcgaagtgctgggggtcagtgaatcgcgggtcagc
cagttgcacagccaatgtgccgcacgcttgcggtcacggctgggtgaatggcgcgcgcac
tga

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