Pseudomonas solani Sm006: PSm6_45900
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Entry
PSm6_45900 CDS
T09213
Symbol
foxI_2
Name
(GenBank) ECF sigma factor FoxI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa
Pseudomonas solani Sm006
Pathway
psoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSm6_45900 (foxI_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoa03021
]
PSm6_45900 (foxI_2)
Transcription machinery [BR:
psoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSm6_45900 (foxI_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
WHD_Rv2258c
NirdL-like_HTH
HTH_32
Motif
Other DBs
NCBI-ProteinID:
BCD88183
UniProt:
A0ABM7LF08
LinkDB
All DBs
Position
complement(4989251..4989772)
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AA seq
173 aa
AA seq
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MPSTNAPFHDFYLSHSAWLLGFLRRRLGSGFDAADLMQDTFLRVLLRPRTFDGATGERSY
LATIARGLCIDHWRRRQLEQDWLEAMAARPEPLQASPEQQALIIETLNEVDAMLLRLPHK
VRRAFLMAQLDDMPYREIALAIGVSERMVKKYLAQAFLHCAVLEAELDGLLVE
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgaccaacgcccccttccacgatttctacctcagccattccgcctggctgctg
ggttttctgcgccgtcgcctgggcagcggcttcgatgccgccgacctgatgcaggacacc
ttcttgcgcgtgctgctgcggccccgtaccttcgacggcgccacgggcgagcgctcctac
ctggccaccatcgcccgcggcctgtgcatcgaccactggcggcgccggcagctggagcag
gactggctcgaggccatggccgcccgcccggaaccgctgcaagcgtcccccgagcagcag
gcgctgatcatcgagaccctgaatgaagtcgacgccatgctcctgcgcctgccgcacaag
gtgcgccgcgccttcctcatggcccagctggacgacatgccctaccgcgagatcgccctg
gcgatcggcgtctccgaacgcatggtgaagaagtacctggcccaggccttcctccactgc
gcggtgctggaggcagagctcgacggcctgctggtggagtga
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