KEGG   Pseudomonas solani: PSm6_45980
Entry
PSm6_45980        CDS       T09213                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
psoa  Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:psoa03400]
    PSm6_45980
Enzymes [BR:psoa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PSm6_45980
    5.6.2.6  RNA 3'-5' helicase
     PSm6_45980
DNA repair and recombination proteins [BR:psoa03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    PSm6_45980
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD WHD_4th_Lhr WHD_3rd_Lhr Helicase_C ResIII WHD_2nd_Lhr Cas3-like_C_2 PhoH AAA_25
Other DBs
NCBI-ProteinID: BCD88191
UniProt: A0ABM7LFL2
LinkDB
Position
4998691..5003061
AA seq 1456 aa
MKPTSPTAASALADFHPVVRAWFAGRFAAPTPAQAQAWPAIRAGRSTLVAAPTGSGKTLT
AFLAAIDELVEQGLAEGGLPDACFVVYVSPLKALSNDIRINLDEPLAGIREELQRQGLGD
VEIRTAVRTGDTPQGERQAMRKRAPHILVTTPESLYVLLGSASGRAMLASCRSLIVDEIH
AIAGSKRGSHLALSLERLESLCGRPLQRIGLSATQKPIEAVARFLGGNPASGEAPAPSRD
CLIVDVGYSRERDLAIEVPPLPLEAVMSNDAWETVYDRLALLVAEHRTTLVFVNTRRLAE
RAARHLSERLGNAAVAAHHGSLARELRLDAEQRLKRGELRVLVATASLELGIDIGDVELV
CQLGSPRSIAAFLQRVGRSGHSVGGTPKGRLFPQSRDDLIECAALLDCVRRGELDSLVIP
RQPLDVLAQQIVAEVASQEWDEDALFALVTRAAPYAQLSRASYEAVLAMLAEGYNGRAGV
RAAYLHRDAVNRRLRGRRSARLVALTSGGTIPDAGDYNVLLEPQGMQVGTVHEDFAVESI
AGDVFQLGNQSYRILRIEAGRVRVEDAAGQPPSIPFWLGEAPGRSDELSAGVARLRGEIE
QKLVASDGELQPVIDWLVAERGLSPAAARQMVEYLARARAALGRLPTRDCLVMERFFDES
GGMQLIIHSPLGSRVNRAWGLALRKRFCRNFNFELQAAATEDALVLSLSTSHSFPLDEVW
RYLHSNSAEHLLIQALLDAPLFGVRWRWNATCALGLPRASGGRKVAPQLQRMRSEDLLAS
VFPDQVACQENLVGEREVPDHPLVAQTLDDCLHEAMDAEAWLALLRRMESGAVELVARDL
PAPSALAAEILGARPYAFLDDAPLEERRTQAVQNRRWSDPESADDLGALDAEAIVAVAEE
AWPRVRDADEMHEALLALGCITPEEIAANDGWAGWLAQLAKARRAACLHLEDRPAFWLAA
ERLPQLLALHPLGSLKPAIVAPAGHDRPWQAEAALVELVRSRLGGFGPLTLARLAADLCQ
APGDIAFALAALEREGHVLRGRFSPGVAADEWCERHLLARIHRYTVKRLRREIEPVEPAD
FMRFLCDWQHLSAGTRLRGAEALGGVLGLLEGYQAAAAAWEAELLPTRVADYGINWLDDL
CRSGRIAWSRLAAPARASSGPLRSTPILLLPRKSQGTWRVCAGAGPVAEPSPRAARVREV
LAGQGALFFDELLDETRLLRSELEDCLGELVALGLASADSFAGLRSLLLPAARRSRNDRR
ARLALANMQDAGRWSLLRGRGEEGGAPPAEALEHVARTLLRRYGVVCWRLLEREADWLPS
WRELLRVYHRLEARGEVRGGRFVAGVAGEQFALPDAVGLLREVRKRPLTGELVGFSACDP
LNLLGTLLPGAKVPAVVGNRLLLRDGVPVATLVAGKVNLLQAADGFSAAEWQAALIRQPT
ASALQGHGARRMTLRP
NT seq 4371 nt   +upstreamnt  +downstreamnt
atgaagccgacttcccccaccgccgccagcgccctggccgacttccacccggtcgtgcgg
gcctggttcgccgggcgtttcgccgcgcccaccccggcccaggcccaagcctggccggcc
atccgcgccgggcgctcgaccctggtggccgcgcccaccggttccggcaagaccctcacg
gcctttctcgccgccatcgacgagctggtggagcagggcctggccgagggcgggctgccg
gacgcctgcttcgtggtctatgtgtcgccgctcaaggcgctgtccaacgacatccgcatc
aacctcgacgagcccctggccggcatccgcgaggaactgcagcgccagggcctgggcgac
gtggagatccgcacggcggtgcgcaccggcgacacgccccagggcgagcgccaggccatg
cgcaagcgcgcgccgcacatcctggtgaccacgcccgagtccctctatgtactgctcggt
tccgcctccgggcgggccatgctcgccagctgccgcagcctgatcgtcgacgagatccac
gccatcgccgggagcaagcgcggcagccacctggcactgagcctggagcgcctggaaagc
ctctgcggccgaccgttgcagcgcatcggcctgtcggccacgcaaaagcccatcgaggcg
gtggcgcgttttctcggcggcaaccccgccagcggcgaggccccggcgccgtcccgtgat
tgcctgatcgtcgatgtcggctacagccgcgagcgcgacctggccatcgaggtgccgccg
ctgccgctggaagcggtgatgagcaacgacgcctgggaaacggtctacgaccgcctggcg
ctgctggtggccgagcaccgcaccacgctggtgttcgtcaacacgcggcgcctggccgag
cgtgccgcgcggcacctctccgaacgcctgggcaacgccgccgtcgccgcccaccacggc
agcctggcccgcgagctgcgcctggacgccgagcagcgcctgaagcgcggcgagctgcgg
gtgctagtggccaccgcctccctggaactgggcatcgatatcggcgatgtcgagctggtc
tgccagctgggttcgccgcgcagcatcgccgccttcctgcagcgtgtcgggcgttccggc
cacagcgtcggcggcacgcccaaggggcgcctgttcccgcagtcgcgggacgacctgatc
gaatgcgcggcactgctcgactgcgtgcgccgcggcgagctggatagcctggtgatcccc
cggcagccgctggatgtgctggcccagcagatcgtcgccgaggtggccagccaggagtgg
gacgaggatgcgctgttcgccttggtgacccgcgccgcgccctatgcgcaactgagccgg
gccagctacgaggcggtgctggccatgctcgccgagggctacaacggccgcgccggcgtg
cgcgccgcctacctgcaccgtgatgcggtcaaccgccgcctgcgcgggcggcgctcggcg
cggctggtggcgctgacctccggcggcaccatccccgatgccggcgactacaacgtgctg
ctggagccccagggcatgcaggtgggcacggtgcacgaggacttcgccgtggagagcatc
gccggcgatgtgttccagctgggcaaccagtcctaccgcatcctgcgcatcgaggccggg
cgggtgcgggtggaggacgccgccgggcagccgccgagcatcccgttctggctgggcgag
gcgccggggcgcagcgacgagctgtccgccggggtcgcgcggctgcgcggcgagatcgag
cagaagctggtggcgagtgacggcgagctgcagccggtcatcgactggctggtggccgag
cgtggcctgagcccggcggcggcccggcagatggtggaatacctggcccgcgcccgtgcc
gccctgggccgtttgccgacccgcgattgcctggtgatggagcgcttcttcgacgaatcc
ggcggcatgcagctgatcatccattcgcccctcggcagccgggtcaaccgcgcctggggg
ctggccctgcgcaagcgcttctgccgcaacttcaacttcgagctgcaggccgccgccacc
gaagacgccctggtgctgtcgctgtccaccagccacagcttcccgctggacgaggtgtgg
cgctacctgcattccaacagcgccgagcacctgctgatccaggcgctgctggacgcgccg
ctgttcggcgtgcgctggcgctggaacgccacctgcgccctgggcctgccccgtgcctcc
gggggccgcaaggtggcgccgcagctgcagcgcatgcgcagcgaagacctgttggccagc
gtcttccccgaccaggtggcctgccaggagaacctggtgggcgagcgcgaggtgcccgat
cacccgctggtggcgcagaccctcgacgactgcctgcacgaggccatggacgccgaagcc
tggctggccctgctgcggcgcatggagagtggcgccgtcgaactggtggcccgcgacctg
ccggcgccctcggcgctggcggcggaaatcctcggtgcgcggccctacgcctttctcgac
gacgcgccactggaagagcgtcgtacccaggcggtacagaaccgccgctggagcgacccg
gaatccgccgacgacctcggcgccctagatgccgaggccatcgttgccgtcgccgaggaa
gcctggccccgggtgcgtgatgccgacgagatgcacgaggcgctgctggcgttgggctgc
atcacccccgaggaaattgcggccaacgacggctgggcgggctggctggcgcaactggcc
aaggcccgtcgcgccgcctgcctgcacctggaggatcgcccggcgttctggctcgccgcc
gagcgcctgccacagctattggccctgcacccgttgggatcgttgaaacccgccatcgtc
gccccggcgggccatgaccggccctggcaggccgaagccgcactggtggagttggtgcgc
tcgcgtctgggcgggttcggcccgctgaccctggcacgcctggccgccgacttgtgccag
gcaccgggggatatcgccttcgccctggccgccctggagcgcgaggggcatgtgctgcgc
ggccgcttcagcccgggtgtggcggcggacgagtggtgcgagcgccacctgctggcgcgc
atccaccgctacacggtcaagcgcctgcggcgggagatcgaaccggtggagccggccgat
ttcatgcgctttctttgcgattggcagcacctctcggcgggcacccgtctgcgcggggcc
gaagccctgggcggggtgctgggtttgctggagggctaccaggccgctgcggcggcctgg
gaggcggagctgttgccgacgcgggtggccgactacggcatcaactggctggacgacctg
tgccgctccgggcgcatcgcctggagccgcctggccgcgccggcgcgtgcctccagtggg
cccttgcgcagcacgcccatcctgctgctgccacgcaagagccagggcacctggcgggtc
tgcgccggcgccgggccggtggccgagccgtcgccccgcgcggcccgtgtgcgggaggtg
ctggccgggcagggcgcgttgttcttcgatgaattgctggacgaaacccgcctgctgcgc
agcgagctggaggactgcctcggtgagctggtggccctggggctggccagtgccgacagc
ttcgccggcctgcgctcgctgctgctgcctgccgcacggcgcagccgcaacgatcgccgt
gcgcgcctggcgctggcgaacatgcaggacgccgggcgctggtcactgctgcgcggccgg
ggcgaggagggtggcgcaccgcccgccgaggccctggagcatgtcgcccgcaccttgctg
cgccgctacggcgtggtctgctggcgcctgctggagcgggaggcggactggctgcccagc
tggcgcgagctgctgcgcgtctatcaccgcctggaggcgcggggagaggtgcgcggcggg
cgattcgtcgccggcgtggcgggcgagcagttcgccctgcccgatgcggtcggcctgctg
cgcgaggtgcgcaagcggccgttgacgggcgagctggtggggttctccgcctgcgacccg
ctcaacctgctgggcacgctgctgccgggcgccaaggtgcccgccgtggtgggcaaccgc
ctgctgctgcgcgacggcgtgccggtggcgaccctggtggccggcaaggtcaacctgctg
caggcggccgacggcttcagcgccgccgagtggcaggccgcgctcatccgccaacccacc
gccagcgccctccagggccatggcgccaggcgcatgacgctgcggccgtaa

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