Pseudomonas solani: PSm6_46100
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Entry
PSm6_46100 CDS
T09213
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_46100
Enzymes [BR:
psoa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
PSm6_46100
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
PSm6_46100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
BCD88203
LinkDB
All DBs
Position
complement(5014718..5016262)
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AA seq
514 aa
AA seq
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MVNGHVRRLGLVLGDQLSFDLSLFAALDPARDAVLMAEVNEEASYVPHHPHKIVLVFSAM
RHFAAALEQRGWRVIYTRLDAPDNSGSLAGELRRWHAALGEPELHLTECGEWRVEEALRA
TGLPLNWHADSRFLCSREAFARWAGERKQLRMELFYREMRKRSGLLLEPDGQPLGGSWNF
DADNRKALPKGVRGPFPARFGQDAITREVVALVGERFAHHYGRLEGFDYPVTHAEAQALW
QHFLAFALPAFGDYQDAMAEGEPYLFHARISAALNIGLLDLRQLCADVENAHRQGQVPLN
AAEGFIRQLIGWREYVRGIYWLRMPDYAKLNVFGNSRPLPAFYWTGRTEMRCMAQAIGQT
LELGYAHHIQRLMVTGNFALLAGIAPAAICEWYLAVYLDAFEWVELPNTLGMVMHADGGY
LGSKPYCASGRYIQRMSDHCAACRYRVDRATEEDACPFNALYWHFLMRHSERLGRNPRLA
MPYRNLQRMDQARVDALWERGEWLLARLDAGEAL
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacggccacgttcgccggctcggcctggtgctgggcgaccagctcagcttcgac
ctttcgctgttcgcggccctcgacccggcccgcgacgcggtgctgatggcggaggtcaac
gaagaggcgagctacgtgccgcaccacccacacaagatcgtgctggtcttcagcgccatg
cgccacttcgcggcggcactggagcagcgtggctggcgggtgatctacacccggctcgac
gcacccgacaacagcggcagcctggcgggcgagctgcgccgctggcacgccgccctgggc
gagccggagctgcacctgaccgagtgcggcgaatggcgcgtggaagaggcgctgcgcgcc
accgggttgccgctgaactggcacgccgacagccgcttcctctgctcccgcgaggcgttc
gcgcgctgggcgggtgagcgcaagcaactgcgcatggagctgttctaccgcgagatgcgc
aagcgcagcggcctgctgctggagccggacggccagccgctggggggcagctggaacttc
gacgccgacaatcgcaaggcgctgcccaagggcgtgcgcggcccctttcccgcgcgcttc
ggccaggacgccatcacccgcgaggtggtggctctggtgggcgagcgcttcgcccaccat
tacgggcgcctggagggcttcgactacccggtgacccacgccgaggcccaggcgctctgg
cagcacttcctggcgttcgccctgcccgccttcggcgactaccaggacgccatggccgaa
ggcgagccctacctcttccacgcgcgtatcagcgccgccctgaacatcggcctgctggac
ctgcgccagctctgcgccgacgtggagaatgcccaccgccagggccaggtgccgctcaac
gcggcggaaggcttcatccgccagctgatcggctggcgcgagtacgtgcgcggcatctac
tggctgcgcatgccggattacgccaagctcaacgtcttcggcaacagccggccgctgccg
gcgttctactggaccggccgcaccgagatgcgctgcatggcccaggccatcggccagacc
ctggagctgggctatgcgcaccacatccagcggctgatggtgaccggcaacttcgccctg
ctcgccggcatcgcccccgcggccatctgcgagtggtacctggcggtctacctggacgcc
ttcgagtgggtggagctgcccaacaccctgggcatggtgatgcacgccgacggtggctac
ctcggctccaagccctattgcgccagcggccgctacatccagcgcatgtccgaccattgc
gcggcgtgccgctaccgcgtggaccgtgccaccgaggaggacgcctgcccgttcaacgcg
ctctactggcacttcctgatgcgccacagcgagcgcctgggccgcaacccgcgcctggcc
atgccctatcgcaacctgcagcgcatggaccaggcccgcgtcgatgcgctctgggagcgc
ggcgaatggctgctggcacgactggatgccggcgaggcgctgtga
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