Pseudomonas solani: PSm6_48030
Help
Entry
PSm6_48030 CDS
T09213
Name
(GenBank) transcriptional regulator HexR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoa03000
]
PSm6_48030
Transcription factors [BR:
psoa03000
]
Prokaryotic type
Helix-turn-helix
Other families
PSm6_48030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
CHRD
HTH_AsnC-type
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
BCD88396
LinkDB
All DBs
Position
complement(5213669..5214538)
Genome browser
AA seq
289 aa
AA seq
DB search
MDRVRNLLEQIQGRLEDLNKAERKVAEVILQDPQQATRFSIAALAQAASVSEPTVNRFCR
SFGVNGYPELKMQLAQSLASGAAYVSRAVEADDGPEAYTRKIFGSAIASLDSACNALDPQ
LISRAVDLLIQARQIHFFGLGASAPVALDAQHKFFRFNLAVSAHADVLMQRMLASVAHTG
DLFVIISYTGRTRELVEVARLARQNGASVLGLTAAGSPLARASTLSLDIPLPEDTDIYMP
MTSRIIQLTVLDVLATGVTLRRGVDFQPHLRKIKESLNASRYPADEEPG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggaccgcgtacgcaatcttctggagcagatccagggacgactcgaagacctcaacaag
gccgaacgcaaggtcgccgaagtcattctccaggacccacagcaggcgacgcgcttcagc
atcgccgccctcgcccaggccgccagcgtcagcgagcctacggtgaaccgcttctgccgc
tccttcggcgtcaacggttacccggagctgaagatgcagctggcgcagagcctggccagc
ggcgccgcctacgtcagccgcgcggtagaggcggacgacggccccgaggcctacacgcgc
aagatcttcggcagcgccatcgcgtccctggacagcgcctgcaacgccctcgacccgcag
ctgatcagccgcgccgtggacctgctgatccaggcccggcagatccatttcttcggcctg
ggcgcctcggcaccggtggccctggacgcccagcacaagttcttccgcttcaacctcgcc
gtgtcggcccatgccgatgtgctgatgcagcgcatgctggcttcggtggcccacaccggc
gacctgttcgtgatcatttcctacaccggccgcacccgcgaactggtggaagtggcgcgc
ctggcgcggcagaacggcgcctcggtgctgggcctgaccgccgccggctcgccgctggcc
cgcgccagcaccctgagcctggacatcccgctgccggaggacaccgacatctacatgccg
atgacctcgcgcatcatccagctcaccgtgctcgatgtgctggccaccggcgtgaccctg
cgccgcggcgtcgacttccagccgcacctgcgcaagatcaaggaaagcctcaacgccagc
cgctaccccgcggacgaagagccgggctga
DBGET
integrated database retrieval system
