Pseudomonas solani: PSm6_49680
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Entry
PSm6_49680 CDS
T09213
Symbol
nfxB
Name
(GenBank) HTH-type transcriptional regulator nfxB
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
psoa
Pseudomonas solani
Module
psoa_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psoa03000
]
PSm6_49680 (nfxB)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
psoa01504
]
PSm6_49680 (nfxB)
Transcription factors [BR:
psoa03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
PSm6_49680 (nfxB)
Antimicrobial resistance genes [BR:
psoa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
PSm6_49680 (nfxB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_IclR
HTH_AsnC-type
TetR_N
HTH_31
HTH_24
HTH_6
HTH_10
LacI
Xre-like-HTH
SpoIIID
MarR
HTH_20
TetR_C_29
HTH_26
MarR_2
UPF0175
HTH_11
Tn7_Tnp_TnsA_C
HTH_3
MerR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
BCD88561
LinkDB
All DBs
Position
complement(5444051..5444614)
Genome browser
AA seq
187 aa
AA seq
DB search
MSLTAQDERLLKALAVAFVERPRATLKELAEAAGVSKATLHRFCGTRDNLVDMLITHGET
VINQILSAGDLQQAELLQVLRRLIAEHLMHRELLVFLMFQYKPDTLDPNAEDARWQTYCD
ALDKFFLRGQQEGVFRIDISAALFSELFLSLIFGIVDAERRGRAASSSSAALLELFFLHG
AAAPTRA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgacagctcaagacgaacgacttctcaaggcgctggccgtcgcgttcgtcgag
cgtccacgtgccaccttgaaggaactggcggaagcggccggggtcagcaaggccacgctg
caccgcttctgcggcacgcgggacaacctggtggacatgctcatcacccacggcgagacg
gtgatcaaccagattctctcggccggcgacctgcagcaggccgaactgctgcaggtgctg
cgcaggctgatcgccgaacacctgatgcaccgcgagctgctggtgttcctgatgttccag
tacaagcccgacaccctcgacccgaatgccgaggacgcccgctggcagacctactgcgac
gccctggacaagttcttcctgcgcggccagcaggaaggcgtgttccgcatcgacatcagc
gcggcgctgttctccgaactcttcctgtcgctgatcttcggcatcgtcgacgccgaacgc
cgcggccgcgccgcaagctccagctccgccgccctgctcgagctgttcttcctgcatggc
gccgcggcgccgacccgagcctga
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