Pseudomonas solani: PSm6_52720
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Entry
PSm6_52720 CDS
T09213
Name
(GenBank) type VI secretion system-associated protein
KO
K11893
type VI secretion system protein ImpJ
Organism
psoa
Pseudomonas solani
Pathway
psoa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSm6_52720
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psoa02044
]
PSm6_52720
Secretion system [BR:
psoa02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSm6_52720
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VasE
Motif
Other DBs
NCBI-ProteinID:
BCD88865
LinkDB
All DBs
Position
complement(5796563..5797897)
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AA seq
444 aa
AA seq
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MSWNNRVVWSEGMFLRPQHFQQHDRYLESLVEGRCRALQAGGWGFSELKIDEALLTQGKL
AIVSARGVLPDGTPFDIPGDDVAPVPLDVEDSLRDGIIYLALPLKRAGARDTVEEGEALG
GARYQSAVREVRDDNAPFESRAPVSIGGRALRLLTARDGLGEYAAVGVVRVVEKRADRSL
ALDESYIPPLLDVTASQPLAAFRSELLGLLHQRGEALAGRVVASGAGGASEIADFLLLQL
VNRAEPLVSHLANITPLHPEWFYREAVSLAGEFSTFSASGRRPAEFPAYEHDDLATTFAP
VMLALRQALSMVIDSRAVPIPIIEKAYGVHVAMLADKSLLDNSAFILVVRADVPGESLRS
RFPQQAKIGSVEHIRDLVNLQLPGIALLPMPVAPRQIPYHAGSTYFELDRGSDHWKQLVH
SGGFAFHIAGQFPGLNLAFWAIRS
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggaacaaccgagtggtctggtctgaggggatgttcctgcgtccgcagcatttc
cagcagcacgaccgctacctggagtccctggtggaaggccgctgccgagcactgcaagcc
ggcggctggggtttctccgagctgaagatcgacgaggcgctgctcacccagggcaagctg
gccatcgtctcggcccgtggcgtgctgcccgacggcacccccttcgacatccccggcgac
gacgtggccccggtgccgctggacgtcgaggacagcctgcgtgacggcatcatctacctg
gccctgccgctcaagcgcgccggcgcccgcgacacggtggaggagggcgaggccctcggt
ggcgcgcgctaccagagcgcggtgcgcgaagtgcgtgacgacaacgcccccttcgagagc
cgcgcccccgtgtccatcggtggccgcgccctgcgcctgctcaccgcccgtgacggcctc
ggcgaatacgccgccgtcggcgtggtgcgggtggtggaaaagcgtgccgaccgctccctg
gcgctggacgaaagctacatcccgccgctgctggatgtgaccgcctcgcagcccctggcg
gccttccgcagcgaactgctgggcctgctgcaccaacgtggcgaggccctggccggccgc
gtggtcgcttccggtgccggtggcgcttcggagatcgccgacttcctcctgctgcaactg
gtcaaccgcgccgaacccctggtctcgcacctggccaacatcaccccgttgcacccggaa
tggttctaccgcgaggcggtgagcctggccggcgagttctccaccttctccgccagcggc
cgtcgcccggcggaattcccggcctatgagcacgacgacctggccaccaccttcgccccg
gtgatgctcgccctgcgccaggccctgtcgatggtcatcgacagccgcgctgtgccgatc
cccatcatcgagaaagcctacggcgtgcacgtggcgatgctcgcggacaagagcctgctg
gacaactcggcgttcatcctcgtggtgcgtgccgacgtgcccggcgagtcgctgcgttcg
cgcttcccgcagcaggccaagatcggctccgtggagcacatccgcgacctggtcaacctg
cagctgccgggtatcgcgctgctgccgatgccggtggcgccacggcagatcccgtaccac
gcgggcagcacctacttcgaactcgaccgcggcagcgaccactggaagcaactggtgcat
tccggcggcttcgccttccacatcgctggccagttccctggcctgaacctggccttctgg
gccatccggagttaa
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