Pseudomonas solani: PSm6_52850
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Entry
PSm6_52850 CDS
T09213
Symbol
clpV1
Name
(GenBank) protein ClpV1
KO
K11907
type VI secretion system protein VasG
Organism
psoa
Pseudomonas solani
Pathway
psoa02025
Biofilm formation - Pseudomonas aeruginosa
psoa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PSm6_52850 (clpV1)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
PSm6_52850 (clpV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
psoa02044
]
PSm6_52850 (clpV1)
Secretion system [BR:
psoa02044
]
Type VI secretion system
Imp/Vas secretion system core components
PSm6_52850 (clpV1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
Zeta_toxin
nSTAND3
TniB
AAA_14
AAA_7
AAA_25
ATPase_2
NACHT
AAA_18
Torsin
Hpr_kinase_C
CbiA
SRP54
NBD_SMAX1
Cyclin_N
Motif
Other DBs
NCBI-ProteinID:
BCD88878
LinkDB
All DBs
Position
5808767..5811466
Genome browser
AA seq
899 aa
AA seq
DB search
MSEISRAKLFGKLNSLAYKAIEAATVFCKLRGNPYVELVHWFHQVLQLQDSDLHQIIRQF
NIEPGRLAKDITEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTAYLVVG
ILKTPSLRHALTSISREFDKIKVETLIERFDEIVGSSPENALTATDGFNAGAAPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDDEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPSLKDVELRALDVGLLQAGASMKGEFEQRLRQVIEDVQSS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVDEPSEHRAILMMRGVASTMEKHHQVQILDEALEAAVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELAIIGREHAIGVAIGSRRTDVDNA
LAEERGRLAELEARWNEEKALVDELLATRASLRAAAEPVDGTSREGGADAPSLSEDELNG
LRAKLADLQQRLTALQGETPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLGTH
LKKRIIGQDHALEMIAKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGG
EQNVITINMSEFQEAHTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPD
VHEIFFQVFDKGVMEDGEGRVIDFKNTLILLTTNAGTDLIASLCNDPELMPEPEGIAKSL
REPLLKIFPPALLGRLVTIPYYPLTDEMLKSITRLQLGRIKKRVEGSHKVPFDFDDKVVD
LVVSRCTETESGGRQIDAILTNSMLPDLSREFLGRMLEGRKVEKVVVGAENGEFTYSFD
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaatcagtcgtgccaagctgttcggaaagctgaacagcctcgcctacaaggcg
atcgaagcggccacggtgttctgcaagctgcgtggcaacccctatgtcgagctggtgcac
tggttccaccaggtcctgcagctgcaggattccgacctgcaccagatcatccgccagttc
aacatcgaacccgggcgcctggccaaggacatcaccgaggcgctggatcgcctgccccgt
ggctcgacttcgatcaccgacctgtcctcccacgtcgaggaagcggtggagcgcggctgg
gtctacggcagcctgatgttcggtgagagccaggtgcgcaccgcctacctggtggtgggc
atcctcaagacgccgagcctgcgccatgcgctgacctccatttcccgcgagttcgacaag
atcaaggtggaaaccctgatcgagcgcttcgacgagatcgtcggcagctccccggaaaac
gccctgaccgccaccgacggcttcaacgccggcgctgccccgggcgaggccagcggagcc
atggccccctccgccatgggcaagcaggaagcgctgaagcgtttcaccgtcgacctcacc
gagcaggcccgcagcggcaagctggaccccatcgtcggccgtgacgacgagatccgccaa
ctggtggacatcctcatgcgccgccgccagaacaacccgatcctcaccggcgaggccggc
gtgggcaagaccgccgtggtggaaggcttcgccctgcgcatcgtcgccggcgacgtgccg
ccctcgctgaaggacgtcgaactgcgcgccctggacgtgggcctgctgcaggccggcgcc
agcatgaagggcgagttcgaacagcgcctgcgccaggtgatcgaagacgtacaaagctcg
cccaagccgatcatcctgttcatcgacgaagcccacaccctggtgggtgccggtggcgcc
gccggcaccggcgacgcggccaacctgctcaagccggccctggcgcgcggcaccctgcgc
accgtcgcggccaccacctgggccgagtacaagaaacacatcgagaaggaccccgccctc
acccgccgcttccaggtggtgcaggtggacgagccgtccgagcaccgcgccatcctgatg
atgcgcggcgtcgcctcgaccatggagaagcaccaccaggtgcagatcctcgacgaagcg
ctggaggcggcggtcaagctgtcccaccgctacatccccgcacgccagctgccggacaag
tcggtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgccgtgccg
gccgaggtggacgacagccgccgtcgcatcgaggccctggaaaccgagctggccatcatc
ggccgcgagcacgccatcggcgtcgccatcggcagccgtcgcaccgacgtcgacaacgcg
ctggcggaagagcgcggccgcctggccgagctggaagcccgctggaacgaagagaaggcc
ctggtggacgagctgctggccacccgtgccagcctgcgcgccgccgccgaaccggtggac
ggcaccagccgcgaaggtggcgccgatgcgccgagcctgagcgaagacgagctcaatggc
ctgcgcgccaagctggccgacctgcaacagcgcctcaccgcgctgcagggcgagacgccg
ctgatcctgccaaccgtggactaccaggcggtggcctcggtggtggccgactggaccggc
atcccggtgggccgcatggcccgcaacgagatcgagaccgtgctcaacctgggcacccac
ttgaagaagcgcatcatcggccaggaccacgccctggagatgatcgccaagcgcatccag
acctcccgcgccgggctcgacaaccccagcaagcccatcggcgtgttcatgctcgcgggc
acctcgggcgtgggcaagaccgaaaccgcgctggccctggccgaagccatgtacggcggt
gagcagaacgtcatcaccatcaacatgagcgagttccaggaagcccataccgtctccacc
ctcaagggtgccccgcccggctacatcggctacggcgaaggcggcgtgctcaccgaggcg
gtacggcgcaagccctacagcgtggtgctgctggacgaggtggagaaggcccacccggac
gtgcacgagatcttcttccaggtgttcgacaagggcgtgatggaagacggcgaaggccgg
gtgatcgacttcaagaacaccctgatcctgctcaccaccaacgccggcaccgacctgatc
gccagcctgtgcaacgaccccgagctgatgcccgaacccgaaggcatcgccaagtcgctg
cgcgagccgctgctgaagatcttcccgccggccctgctcggccgcctggtgaccatcccc
tactacccgctgaccgacgagatgctgaagagcatcacccgcctgcaactgggccgcatc
aagaagcgcgtggagggctcgcacaaggtgcccttcgacttcgacgacaaggtggtggac
ctggtggtttcgcgctgcaccgaaaccgagagcggcggtcgccagatcgacgccatcctc
accaacagcatgctgccggacctctcccgcgagttcctcggccgcatgctggaaggccgc
aaggtcgagaaggtggtggtgggcgccgagaacggcgagttcacctacagcttcgattga
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