Pseudomonas solani Sm006: PSm6_53280
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Entry
PSm6_53280 CDS
T09213
Symbol
femI_3
Name
(GenBank) ECF sigma factor FemI
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa
Pseudomonas solani Sm006
Pathway
psoa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PSm6_53280 (femI_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psoa03021
]
PSm6_53280 (femI_3)
Transcription machinery [BR:
psoa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PSm6_53280 (femI_3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
PhyR_sigma-like
HTH_23
HTH_24
HTH_IclR
Rv2175c_wHTH
HTH_31
HTH_38
HTH_7
TnsD
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BCD88921
UniProt:
A0ABM7LH57
LinkDB
All DBs
Position
5860055..5860561
Genome browser
AA seq
168 aa
AA seq
DB search
MSAADQPLNRQIHTLYNDHHGWLHAWLSRRLGNAWDAADLAHDTFLRLLGRQVGRDFGSE
PRALLTHIAKGLVIDRWRRQDIEQAYLESIAHLPEPEAPSPETRLLILETLCRIEALLAD
MPEKTRQAFLLSQLEGLGYAEIATRLGVSLTSVKRYMRDAFLACLSAA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagccgatcagcccctcaaccgccagatccacaccctctacaacgaccaccac
ggctggctccacgcttggctcagccggcgcctgggcaacgcctgggatgcggcggatctg
gcccacgacaccttcctgcgcctgctgggccgccaggtcgggcgtgatttcggcagcgaa
ccccgggccctgctcacccatatcgccaagggcctggtgatcgaccgctggcggcgccag
gacatcgaacaggcctacctggaaagcatcgcccacctgcccgagcccgaagcgccctcc
cccgaaacccggctgctgatcctggaaaccctgtgccgcatcgaggcgctgctcgccgac
atgcccgagaagacccgccaggctttcctcctgtcccagctcgaaggcctgggctacgcc
gagatcgccacgcgcctgggcgtgtccctgaccagcgtcaagcgctacatgcgcgacgcc
ttcctcgcctgcctgagcgcagcctga
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