KEGG   Pseudomonas solani Sm006: PSm6_53280
Entry
PSm6_53280        CDS       T09213                                 
Symbol
femI_3
Name
(GenBank) ECF sigma factor FemI
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
psoa  Pseudomonas solani Sm006
Pathway
psoa02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psoa00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PSm6_53280 (femI_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:psoa03021]
    PSm6_53280 (femI_3)
Transcription machinery [BR:psoa03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PSm6_53280 (femI_3)
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF PhyR_sigma-like HTH_23 HTH_24 HTH_IclR Rv2175c_wHTH HTH_31 HTH_38 HTH_7 TnsD HTH_11
Other DBs
NCBI-ProteinID: BCD88921
UniProt: A0ABM7LH57
LinkDB
Position
5860055..5860561
AA seq 168 aa
MSAADQPLNRQIHTLYNDHHGWLHAWLSRRLGNAWDAADLAHDTFLRLLGRQVGRDFGSE
PRALLTHIAKGLVIDRWRRQDIEQAYLESIAHLPEPEAPSPETRLLILETLCRIEALLAD
MPEKTRQAFLLSQLEGLGYAEIATRLGVSLTSVKRYMRDAFLACLSAA
NT seq 507 nt   +upstreamnt  +downstreamnt
atgtcggcagccgatcagcccctcaaccgccagatccacaccctctacaacgaccaccac
ggctggctccacgcttggctcagccggcgcctgggcaacgcctgggatgcggcggatctg
gcccacgacaccttcctgcgcctgctgggccgccaggtcgggcgtgatttcggcagcgaa
ccccgggccctgctcacccatatcgccaagggcctggtgatcgaccgctggcggcgccag
gacatcgaacaggcctacctggaaagcatcgcccacctgcccgagcccgaagcgccctcc
cccgaaacccggctgctgatcctggaaaccctgtgccgcatcgaggcgctgctcgccgac
atgcccgagaagacccgccaggctttcctcctgtcccagctcgaaggcctgggctacgcc
gagatcgccacgcgcctgggcgtgtccctgaccagcgtcaagcgctacatgcgcgacgcc
ttcctcgcctgcctgagcgcagcctga

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