Pseudomonas solani: PSm6_56410
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Entry
PSm6_56410 CDS
T09213
Name
(GenBank) hypothetical protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
psoa
Pseudomonas solani
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psoa03009
]
PSm6_56410
Ribosome biogenesis [BR:
psoa03009
]
Prokaryotic type
ribosomal protein modification factors
PSm6_56410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BCD89234
LinkDB
All DBs
Position
6178596..6180791
Genome browser
AA seq
731 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCQ
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADIAEKDRLGILRSIDRCTVKKVVQQ
GPEFVIEEVENLDADAQALLIPSSSEQSTYIAGKDLPLEETIANMSGILASLGMKIEIAS
WRNIVPNVWSLHIRDAASPMCFTNGKGATKESALASALGEFIERLNCNFFYNDQFWGEDI
ANADFVHYPNERWFKPGPKDALPAEILDAHCLEIYNPDGELRGSHLYDTNSGNTVRGICS
LPFVRQSDGETVYFPSNLIENLYLSNGMSAGNTLVEAQVQCLSEIFERAVKREILEGEMA
LPDVPQAVLEKYPSILAGIRGLEEQGFPVLVKDASLGGEFPVMCVTLMNPRTGGVFASFG
AHPSFEVALERSLTELLQGRSFEGLNDLPQPTFEGHAVTEPNNFVEHFIDSSGVVSWRFF
SAKADFEFVEWDFSGQGEDSNAEEAATLFGILEDMGKEVYVATYDDLGANACRILVPGYS
EIYPVEDLIWDNTNKALLFRADILNLHSLPDRGLKSLLKNLNNTEVDDYTDITTLIGVEF
DDNTVWGQLTILELKLLIHLALKKFEDAKELVEAFLQYNDNTVERGLFYQALNAALEVTL
DDDLEMDDYEANFRRMFGNPRMDAVLGSLDGSVRFYGLTPTSMKLEGLDRHQRLVESYKK
LHAARARAAAK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaaccttcgtctcgaagccaagttcgacgacttc
acggtcatcgccgaccaaccgatccgctacaagggcgacggttcggcaccggggccgttc
gactacttcctggcctcctcggccctgtgcgcggcgtacttcgtgaagctgtactgccag
acgcgcaacatccccaccgagaacatccggctgtcgcagaacaacatcgtcgacccggaa
aaccgctaccagcagatcttcaagatccaggtcgagctgccggcggacatcgccgagaag
gaccgcctcggcatcctccgctccatcgaccgctgcaccgtgaagaaggtggtgcagcag
ggccccgagttcgtcatcgaagaggtggagaacctcgacgccgacgcccaggccctgctg
atcccgagcagcagcgagcagagcacctacatcgccggcaaggacctgccgctggaagaa
accatcgccaacatgtccggcatcctcgccagcctgggcatgaagatcgagatcgcctca
tggcgcaacatcgtgcccaacgtctggtcgctgcacattcgcgacgccgcctcgccgatg
tgcttcaccaacggcaagggcgccaccaaggaaagcgccctggcctccgcgctgggcgag
ttcatcgagcggcttaactgcaatttcttctacaacgaccagttctggggcgaggacatc
gccaacgccgacttcgtccactaccccaacgagcgctggttcaagccgggcccgaaggac
gcgctgcccgccgagatcctcgacgcccactgcctggaaatctacaacccggacggcgag
ctgcgcggctcgcacctgtacgacaccaactccggcaacaccgtgcgcggcatctgctcg
ctgcccttcgtgcggcagtcggatggcgagacggtgtacttcccgtccaacctgatcgag
aacctctacctcagcaacggcatgagcgccggcaacaccctggtcgaagcccaggtgcag
tgcctgtcggaaatcttcgagcgcgcggtgaagcgcgaaatcctcgaaggcgagatggcc
ctgccggacgtgccccaagccgtgctggagaagtacccctccatcctcgccggcatccgt
gggctggaagagcaaggcttccccgtgctggtgaaggacgcctccctgggcggtgaattc
ccggtgatgtgcgtcaccctgatgaacccacgcaccggcggcgtgttcgcctccttcggc
gcccaccccagcttcgaagtggcgctggagcgcagcctcaccgagctgctccagggccgc
agcttcgaaggcctcaacgacctgccgcagccgaccttcgaaggccacgcggtgaccgag
ccgaacaacttcgtcgagcacttcatcgactccagcggcgtggtgtcgtggcgcttcttc
agcgccaaggccgatttcgagttcgtcgagtgggacttctccggccagggcgaagacagc
aacgccgaggaagccgccaccctgttcggcatcctcgaggacatgggcaaggaagtgtac
gtggccacctacgacgacctcggcgccaacgcctgtcgcatcctggtgccgggctactcg
gagatctacccggtggaggacctgatctgggacaacaccaacaaggcgctgctgttccgt
gcggacatcctcaacctgcacagcctgcccgaccgtggcctgaagtccctgctgaagaac
ctcaacaacaccgaggtcgacgactacaccgacatcaccacgctgatcggcgtcgagttc
gacgacaacaccgtctggggccagctgaccatcctcgagctgaagctgctgatccacctg
gcgctgaagaagttcgaagacgccaaggagctggtggaagccttcctgcaatacaacgac
aacaccgtcgagcgcgggctgttctaccaggccctgaacgcggcgctggaagtgaccctg
gacgacgacctggagatggacgactacgaagccaacttccgccgcatgttcggcaacccg
cgcatggacgcggtgctgggctcgctggatggcagcgtgcgcttctacggcctgacgccc
accagcatgaagctggaaggcctcgaccggcaccaacgcctggtggagagctacaagaag
ctccacgccgcgcgggccagggcagcagccaagtaa
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