Pseudomonas solani: PSm6_59580
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Entry
PSm6_59580 CDS
T09213
Symbol
alkA
Name
(GenBank) 3-methyladenine DNA glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
psoa
Pseudomonas solani
Pathway
psoa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PSm6_59580 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psoa03400
]
PSm6_59580 (alkA)
Enzymes [BR:
psoa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PSm6_59580 (alkA)
DNA repair and recombination proteins [BR:
psoa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PSm6_59580 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
RecR_HhH
HHH
Motif
Other DBs
NCBI-ProteinID:
BCD89551
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All DBs
Position
6519681..6520571
Genome browser
AA seq
296 aa
AA seq
DB search
MNASLPAATGLHLPYIEPWSWEQFLRHFALRRLPGVERIDAASYCRSFRLGELHGWFRVR
PGAGHLALELSPSCIGREAELVARVRQMFDLDSDPLAIARHLRGDPQLQPLLERYPGLRL
PVAFDPFEQGVRTIIGQQVTVKAAVTIAGRLVERLGEPLADSPDDGPLRLFPTARAIADD
PLPGIGMPGKRVETLRRFADAVASGALELSVAEGVEALIARLCALPGIGPWTAEYIALRA
FGQPDAFPTADLGLLKSPFWGETGISAKALASRAEHWRPWRAYAAVYLWHSYASEN
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcatccctccccgccgccaccggcctgcacctgccctacatcgaaccctggagc
tgggagcagttcctgcgccacttcgccctgcgccgcctgcccggcgtcgaacgcatcgac
gccgccagctactgccgcagcttccgcctcggcgagctgcacggctggttccgcgtgcgc
cccggcgccgggcacctcgccctggaactgagcccctcgtgcatcggccgcgaggcggaa
ctggtggcgcgggtgcggcagatgttcgacctcgacagcgaccccctggccatcgcccgg
cacctgcgcggcgacccgcagctgcaacccctgctggagcgctacccgggcctgcgcctg
ccggtggccttcgaccccttcgagcagggcgtgcgcaccatcatcggccagcaggtgacg
gtgaaggcggcggtgaccatcgccgggcgcctggtggaacgcctcggcgagcccctggcg
gactcccccgatgacggcccgctgcgcctgttccccaccgcccgcgccatcgccgatgac
ccgttgccgggtatcggcatgcccggcaaacgcgtggaaaccctgcgccgcttcgccgac
gcggtggcctccggcgccctggaactctcggtggccgagggcgtcgaagccctcatcgca
cggctctgcgccctgcccggcatcggtccctggaccgccgaatacatcgccctgcgtgcc
ttcggccagccggatgccttccccaccgccgacctgggcctgctcaagtcacccttctgg
ggggaaaccggcatcagcgccaaggccctggccagccgcgccgagcactggcgaccctgg
cgcgcctacgccgccgtctacctctggcacagctacgcatcggagaattga
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