Pseudomonas solani: PSm6_60500
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Entry
PSm6_60500 CDS
T09213
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
psoa
Pseudomonas solani
Pathway
psoa00020
Citrate cycle (TCA cycle)
psoa00190
Oxidative phosphorylation
psoa00650
Butanoate metabolism
psoa00720
Other carbon fixation pathways
psoa01100
Metabolic pathways
psoa01110
Biosynthesis of secondary metabolites
psoa01120
Microbial metabolism in diverse environments
psoa01200
Carbon metabolism
Module
psoa_M00009
Citrate cycle (TCA cycle, Krebs cycle)
psoa_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
psoa_M00149
Succinate dehydrogenase, prokaryotes
psoa_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
psoa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PSm6_60500 (sdhA)
00650 Butanoate metabolism
PSm6_60500 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
PSm6_60500 (sdhA)
00720 Other carbon fixation pathways
PSm6_60500 (sdhA)
Enzymes [BR:
psoa01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
PSm6_60500 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
HI0933_like
Pyr_redox_2
GIDA
FAD_binding_3
Thi4
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
BCD89643
LinkDB
All DBs
Position
complement(6609225..6610997)
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AA seq
590 aa
AA seq
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MSSIRTLSYDAIIVGGGGAGMRAALQLAQGGHKTAVVTKVFPTRSHTVSAQGGITCAIAS
ADPNDDWRWHMYDTVKGSDYIGDQDAIEYMCSVGPEAVFELEHMGLPFSRTEQGRIYQRP
FGGQSKDFGKGGQAARTCAAADRTGHALLHTLYQANLKNGTSFLNEWYAVDLVKNQDGAV
VGIIAICIETGETVYIRSKAVVLATGGAGRIYASTTNALINTGDGIGMALRAGVPVQDIE
MWQFHPTGIAGAGVLVTEGCRGEGGYLINAHGERFMERYAPNAKDLAGRDVVARSMVKEV
LAGNGCGPDKDHVLLKLDHLGEEVLHSRLPGICELSKTFAHVDPVVAPVPVIPTCHYMMG
GVATNIHGQAITQDASGKDIIIDGLFAVGEVACVSVHGANRLGGNSLLDLVVFGRAAGLH
LEKALKEGIEHRGASETDLELSLKRLSGVNERSSGEDVAPLRKELQNCMQNYFGVFRTGE
YMQKGIAQLADLRERIANVKIADKSQAFNTARIEALELQNLLEVAEATAIAAEVRKESRG
AHAREDFEERDDENWLCHTLYYPGEKRVTKRDVNFAPKTVPAFEPKVRTY
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcattcgtactctttcctacgacgccatcatcgttggtggcggcggcgccggc
atgcgtgctgcgctgcaactggctcaaggcggccacaagactgccgtggtcaccaaggtc
ttcccgacccgctcgcacaccgtttccgctcagggcggcatcacctgcgccatcgcttcg
gccgacccgaacgacgattggcgctggcacatgtacgacaccgtcaagggctccgactac
atcggtgaccaggacgcgatcgaatacatgtgctccgtcggcccggaagccgtgttcgag
ctggagcacatgggcctgccgttctcccgtaccgagcaaggccgcatctaccagcgtccg
ttcggtggccagtccaaggacttcggcaagggtggccaggctgcgcgtacctgcgctgcc
gccgaccgtaccggtcatgccctgctgcacaccctgtaccaggccaacctgaagaacggc
acctcgttcctcaacgagtggtacgccgtcgacctggtgaagaaccaggatggcgccgtg
gtcggcatcatcgccatctgcatcgagaccggcgagaccgtctacatccgctccaaggcc
gtggtcctggccaccggtggcgctggccgcatctatgcgtccaccaccaacgccctgatc
aacaccggtgacggtatcggcatggcactgcgtgccggtgtgccggtgcaggacatcgag
atgtggcagttccacccgaccggtatcgccggcgccggcgtcctcgtgaccgaaggctgc
cgtggtgagggtggctacctgatcaacgcccatggcgagcgcttcatggagcgttacgct
ccgaacgccaaggacctggccggccgcgacgtggtcgcccgctccatggtcaaggaagta
ctggccggcaacggctgtggcccggacaaggaccacgtactgctgaagctcgaccacctg
ggcgaggaagtgctgcacagccgcctgccgggtatctgcgaactgtcgaagaccttcgct
cacgtcgaccccgtcgtcgctccggtaccggtgatcccgacctgtcactacatgatgggc
ggcgttgccaccaacattcatggccaggccatcacccaggatgccagcggcaaggacatc
atcatcgatggcctgttcgcggtcggcgaagtcgcctgcgtgtcggtacacggtgccaac
cgcctgggcggcaactcgctgctcgacctggtggtattcggtcgcgccgccggtctgcac
ctggaaaaagccctcaaggaaggtatcgagcaccgtggtgcttcggaaaccgacctggag
ctgtcgctcaagcgcctgtccggcgtcaacgagcgcagcagcggcgaagacgtggctccg
ctgcgtaaagaactgcagaactgcatgcagaactacttcggtgtattccgcaccggcgag
tacatgcagaagggcatcgcccagttggccgacctgcgcgagcgtatcgccaacgtcaag
atcgccgacaagagccaggccttcaacaccgcacgtatcgaagcactggaactgcagaac
cttctcgaagtggccgaagcaactgcgatcgcagcggaggtccgcaaggaatcccgtggc
gcgcatgcccgcgaagacttcgaagagcgtgatgacgagaactggctgtgccacaccctg
tactacccgggtgagaagcgcgtcaccaagcgcgacgtcaacttcgcgccgaagaccgtt
cctgcgtttgaacccaaagtacgtacttattaa
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