Pseudomonas solani PSBB082: ACSC9U_17005
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Entry
ACSC9U_17005 CDS
T11792
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
psob Pseudomonas solani PSBB082
Pathway
psob03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACSC9U_17005 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psob03400
]
ACSC9U_17005 (uvrB)
DNA repair and recombination proteins [BR:
psob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACSC9U_17005 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACSC9U_17005 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
XXL40908
LinkDB
All DBs
Position
complement(3738408..3740423)
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQLVEGLEAGLSHQTLLGVTGSGKTFSIANVISQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNSVEYFVSYYDYYQPEAYVPSSDTYIEKDASINDHIEQ
MRLSATKALLERSDAIIVATVSSIYGLGDPTSYLRMVLHLDRGDKIDQRELLRRLADLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRVELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPREVILGAVDKIKEELKERLDYLRSNNKLVEAQRLEQRTRFDLEMIVELG
YCNGIENYSRYLSGREPGQAPPTLYDYLPANSLLVIDESHVSVPQVGAMFKGDRSRKENL
VEYGFRLPSALDNRPMRFDEWEAMSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPE
IEVRPATTQVDDLLSEIRKRVAVEQRVLVTTLTKRMAEDLTDYLADHEVRVRYLHSDIDT
VERVEIIRDLRTGAFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLHGKAILYADNMTGSMQRAIDETDRRRNKQIAFNEANGIVPRGVQKDVQDILEGATV
PGSRSNKRKAMAKVAEEHARYEAELRSPSEITKRIRQMEEKMYQLARDLEFEAAAQLRDE
IQKLRDRLLQV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttcaactcgtcacccgcttccagccggccggcgaccaacccgaagccatt
cgccagttggtcgagggcctggaagcgggcctgtcgcaccagacgctgctgggggtgacc
ggttcgggcaagaccttcagcatcgccaatgtcatctcccaggtgcagcgcccaacgctc
gtactggcgccgaacaagacgctggctgcccagctctacggcgagttcaaggccttcttc
ccgaacaactccgtcgagtatttcgtctcctactacgactactaccagccggaggcttac
gttccttcctcggatacctatatcgagaaggacgcttcgatcaacgaccacatcgagcag
atgcgcctgtccgccaccaaggcgctgcttgagcggtccgatgcgatcatcgtggcaacg
gtttcatccatctatggcctgggcgaccccacgtcctacctgcggatggttctgcatctc
gatcggggcgacaagatcgaccagcgcgagctgttgcgtcgcctggcggacctgcaatac
acccgcaacgatatggacttcgcccgtgccaccttccgtgttcgcggcgatgtgatcgat
atcttcccggcggaatccgatctcgaagccatccgcgtcgagcttttcgatgatgaagta
gaaagcctgtcggccttcgacccgctgacgggtgaggtgatccgcaagttgccgcgtttc
accttctaccccaagagtcactacgtaacgccgcgggaagtgatcctgggcgcggtggac
aagatcaaggaggagctcaaggagcgcctcgactacctgcgcagcaacaacaagctggtg
gaggcccagcgccttgagcagcgcacccgtttcgacctggagatgatcgtcgaactgggc
tactgcaacggcatcgagaactactcgcgctatctctccggacgcgagcccggccaggcg
ccacctaccctctatgactacctgccggccaactccctgttggtgatcgatgagtcccac
gtcagcgttcctcaggtcggtgcgatgttcaagggcgaccgctcgcgcaaggagaacctg
gtggagtacggtttccgcctgccgtcggcgctggacaaccgacccatgcgtttcgacgag
tgggaagcgatgagcccgcagaccatcttcgtttccgcaacgcccgggccctacgaggcg
gagcatgcggggcgcgtggtggagcaggtggtgcgcccgaccggactggtggaccccgag
atcgaggtgcgcccggccaccacccaggtcgacgacctgctctccgagatccgcaagcgc
gttgccgtggagcagcgtgtccttgtcacaaccctcaccaagcgcatggccgaggacctc
accgactacctcgccgaccacgaggtgcgtgtgcgttacctgcactcggacatcgatacc
gtggagcgcgtcgagatcatccgtgacctgcgcaccggtgccttcgacgtgttggtgggc
atcaacctgctgcgtgaggggctggacatgcccgaggtgtccctggtggccattctcgat
gccgacaaggaaggcttcctgcgctccgagcgctcgctgatccagaccatcggccgcgcg
gcgcgtaacctgcacggcaaggcgattctctatgccgacaacatgaccggctccatgcag
cgggccatcgacgagaccgatcgccgccgcaacaagcagatcgcgttcaacgaggcgaac
ggcattgttccccggggcgtgcagaaggacgtccaggacatccttgaaggcgccaccgtg
cccggctcgcgcagcaacaagcgcaaggccatggccaaggtggcggaggagcacgcacgt
tacgaagccgagctgcgctcgccgagcgagatcaccaagcgcatccgccagatggaagag
aagatgtaccagctggcccgcgacctggagttcgaggccgccgcgcagctgcgcgacgag
atccagaagctccgcgacaggttgctgcaggtgtga
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