Pseudomonas solani PSBB082: ACSC9U_17890
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Entry
ACSC9U_17890 CDS
T11792
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
psob Pseudomonas solani PSBB082
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psob03021
]
ACSC9U_17890 (rapA)
Transcription machinery [BR:
psob03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ACSC9U_17890 (rapA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XXL41078
LinkDB
All DBs
Position
3932157..3935006
Genome browser
AA seq
949 aa
AA seq
DB search
MAQQYQPGQRWISDSEAELGLGTILASDGRLLTVLYPATGETRQYALRNAPLTRVRFAPG
DEITHFDGWKLTVQEVDDIDGLLVYHGLTAQHEERTLPETQLSNFIQFRLASDRLFAGQI
DPMNWFGLRYHTLQHQSRLLQSSLWGLGGARAQPIAHQLHIAREVADRVAPRVLLADEVG
LGKTIEAGLVIHRQLLSGRANRVLILVPENLQHQWLVEMRRRFNLQVALFDAERFLESDA
SNPFEDAQLALVSLEWLKDSEKAQDAAFAAGWDLLVVDEAHHLVWHPEQASDEYRLVEQL
AEVIPGVLLLTATPEQLGQDSHFARLRLLDPARFHDLEAFRAESANYKPIAEAVQELLDQ
GRLSPGAHATISGFLGAEGEALLAAVTDGDSEAAARLVRELLDRHGTGRLLFRNTRAAVQ
GFPERNLHPYPLPSPVEYMELPVGEHPDLYPEVSFQAQQESGDEAERWWRFDPRVEWLID
TLKMLKKFKVLVICAHAETALDLEDALRVRSGIPATVFHEGMSILERDRAAAYFADEEFG
AQVLICSEIGSEGRNFQFSHHLVLFDLPAHPDLLEQRIGRLDRIGQKHTIQLHVPYLETS
PQERLFQWYNQALNAFLATCPTGNALQHQFGPRLLPLLDGGDDEQWQALVDEAEAERKRL
EGELHAGRDRLLELNSGGTGEGQALVEAIHEQDDEFALPIYMEALFDAFGIDSEDHSENA
LVLKPGEKMLDAGFPLGDDEGVTITYDRNQALSREDMQFLTWEHPMVQGGMDLVLSGSMG
NTSVALIKNKALKPGTVLLELLYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLASKVA
FDTLNDQLESVPRGSANKFVQAQRDVLSAQIHAAEAKIRPRHEARVADAVKRLTAELDEE
LARMIALKAVNPSVRDSEIDALRKQRDDGLALMEKAALRLEAIRVLVAG
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagcagtaccaaccggggcaacgctggatcagtgacagcgaagcggaactgggg
ctcgggaccatcctggcatcggatggacgcctgcttacagtgctctacccggccacgggc
gaaacccgccagtacgccttgcgcaatgcgcccctgacccgcgtgcgcttcgcgccgggc
gacgagatcacccacttcgacggctggaagctgaccgtccaggaagtcgacgacatcgac
ggcctgctggtctatcacggcctcaccgcgcagcacgaagaacgcaccctgccggaaacc
cagctctccaacttcatccagttccgcctggccagcgaccgcctgttcgccgggcagatc
gacccgatgaactggttcggcctgcgctaccacaccctgcaacaccagagccgcctgctg
cagtcctccctctggggcctgggcggcgcccgcgcacaacccatcgcccaccagctgcat
atcgcccgtgaagtggccgaccgcgtcgccccgcgcgtactgctggcggacgaagtgggc
ctgggcaagaccatcgaggccggcctggtgatccatcgccagctgctctcgggccgcgcc
aaccgcgtgctgatcctggtgccggagaacctccagcaccagtggctggtggaaatgcgc
cgccgcttcaacctgcaggtcgccctgttcgacgccgagcgcttcctcgagagtgacgcc
agcaaccccttcgaggacgcgcaactggcgctggtctccctggagtggctgaaggacagc
gagaaggcccaggacgccgccttcgccgccggctgggacctgctggtggtggacgaagcc
caccacctggtctggcacccggaacaggccagcgatgaataccgcctggtggagcaactg
gccgaggtcatccccggcgtgctgctgctcaccgctaccccggaacagctgggccaggac
agccacttcgcccgtctgcgcctgctggacccggcgcgcttccatgacctggaagccttc
cgcgccgaaagcgccaactacaagccgatcgccgaagccgtgcaggagctgctggaccag
ggccgcctgtcccccggcgcccacgccaccatctccggcttcctcggtgccgaaggcgaa
gccctgctggccgccgtcaccgatggcgacagcgaagccgctgcgcgcctggtgcgcgag
ctgctggaccgccacggcaccggccgcctgctgttccgcaacacccgcgccgccgtgcag
ggcttccccgagcgcaacctgcacccctatccgctgccgagccccgtggaatacatggag
ctgccggtgggcgagcaccccgacctgtacccggaagtcagcttccaggcgcagcaggaa
agcggtgatgaagccgagcgctggtggcgcttcgacccccgcgtcgagtggctgatcgac
accctgaagatgctcaagaagttcaaggtgctggtgatctgcgcccacgccgagaccgcc
ctggacctggaagatgccctgcgcgtgcgctccggcatccccgccaccgtgttccacgaa
ggcatgagcattctcgagcgcgaccgtgcggcggcctacttcgccgatgaggagttcggc
gcccaggtactgatctgctccgagatcggcagcgaaggccgcaacttccagttctcccat
cacctggtgctgttcgacctgccggcccacccggacctgctggaacagcgcatcggccgt
ctcgaccgtatcggccagaagcacaccatccagctgcacgtgccctacctggaaaccagc
ccgcaagagcgcctgttccagtggtacaaccaggccctcaacgccttcctcgccacctgc
cccaccggcaacgccctgcagcaccagttcggcccgcgcctgctgccgctgttggacggc
ggtgacgacgagcaatggcaggccctggtggacgaggccgaggccgagcgcaagcgcctg
gaaggcgaactgcacgccggccgcgaccgcctgctggaactcaactccggcggcaccggc
gaaggccaggccctggtggaagccatccacgagcaggacgacgagttcgccctgcccatc
tatatggaagccctgttcgacgccttcggcatcgacagcgaggaccactccgagaacgcc
ctggtgctcaagccgggcgagaagatgctcgacgccggcttccccctgggcgacgacgaa
ggcgtgaccatcacctacgaccgcaaccaggcgctgtcccgcgaggacatgcagttcctc
acctgggaacaccccatggtgcagggcggcatggacctggtgctgtccggctccatgggc
aacacctcggtggcgctgatcaagaacaaggcgctgaaacccggcaccgtgttgctggaa
ctgctctacgtcagcgaagtggtggcaccccgctccctgcagctgggccgctacctgccg
ccggccgccctgcgctgcctgctcgacgccaacggcaacgacctggccagcaaggtcgcc
ttcgacaccctcaacgaccagttggaaagcgtgccgcgtggcagcgccaacaagttcgtc
caggcccagcgcgatgtgctctcggcccagatccacgccgccgaagcgaagatccgcccg
cgtcacgaagcccgcgtggccgatgcggtgaaacgcctgactgccgagctggacgaggag
ctggcgcgcatgatcgccctcaaggccgtcaaccccagcgtccgcgacagcgagatcgac
gccctgcgcaagcagcgtgacgacggcctggcgctgatggaaaaagccgccctgcgcctg
gaggcgatccgcgtgctggtagcgggttga
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