Pseudomonas solani PSBB082: ACSC9U_18890
Help
Entry
ACSC9U_18890 CDS
T11792
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psob Pseudomonas solani PSBB082
Pathway
psob02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACSC9U_18890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psob03021
]
ACSC9U_18890
Transcription machinery [BR:
psob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACSC9U_18890
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_23
Sigma70_r4
GerE
DUF6456
HTH_38
HTH_11
HTH_24
HTH_28
HTH_Tnp_ISL3
HTH_29
PhyR_sigma-like
HTH_AsnC-type
NirdL-like_HTH
HTH_VMAP-M9
HTH_40
Motif
Other DBs
NCBI-ProteinID:
XXL41268
LinkDB
All DBs
Position
4131584..4132117
Genome browser
AA seq
177 aa
AA seq
DB search
MSTLDKSYQRQVQHYYVEHHGWIRAWLQRKLGNASDAADLAHDVFLRLLSRPRQFDSDTH
ARAYLSAMSRHVCVDFWRRQQVERAWAEVLAGQPEAVAPSEEYRAMVLEALQQVHAMLAS
LPPKVAEAFLLAQVQGLGYRAIAERLGVSERTVTSYMAQAMFKCLLLEAELDEALRP
NT seq
534 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccctcgacaagtcctaccaacgccaggtgcagcactactacgtcgagcaccac
ggctggatacgcgcctggctgcaacgcaagctgggcaacgccagcgatgccgccgacctc
gcccatgacgtgttcctgcgcctgctgagcaggccgcgccagttcgacagcgacacccac
gcccgcgcctacctcagcgccatgtcccgccatgtgtgcgtggacttctggcggcgccag
caggtggagcgcgcctgggccgaggtgctggccggccagcccgaggcagtcgcgccctcc
gaggaataccgcgccatggtgctggaggccttgcagcaggtgcacgcgatgctcgccagc
ctgccacccaaggtcgccgaggccttcctcctggcccaggtgcagggcctcggctaccgc
gctatcgccgaacggctcggggtgtccgaacgcaccgtcaccagctacatggcccaggcc
atgttcaagtgcctgctgctggaagccgaactggacgaggcgctgcgcccatga
DBGET
integrated database retrieval system
