Pseudomonas solani PSBB082: ACSC9U_20675
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Entry
ACSC9U_20675 CDS
T11792
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
psob Pseudomonas solani PSBB082
Pathway
psob02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
psob00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACSC9U_20675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psob03021
]
ACSC9U_20675
Transcription machinery [BR:
psob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACSC9U_20675
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
GerE
HTH_11
DUF8073_M
HTH_23
PhyR_sigma-like
HTH_Tnp_ISL3
RovC_DNA-bd
Motif
Other DBs
NCBI-ProteinID:
XXL41601
LinkDB
All DBs
Position
complement(4516146..4516661)
Genome browser
AA seq
171 aa
AA seq
DB search
MNDAVAAPEPCLNTLYREHRSWLESWLRRRLGNAWDAADLTQDTFVRVLAAHQDKPLPRL
QEPRAYLLTVGKRLLINHHQRRSLERAYLDALASLPEAQAPSPEQRWLLLETLQALDELL
DGLPLAVRRAFLWSQLEGLDYASIALRLEVSERTVKRYMAKAYEHCLLVDL
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatgcagtcgcggcacccgaaccctgtctcaataccctctaccgcgaacaccgc
agctggctggaaagctggctgcggcggcgcctgggcaacgcctgggatgctgcggacctg
acccaggacaccttcgtccgcgtgctcgccgcccaccaggacaaaccgctgccgcgcctg
caggagccacgggcctacctgctcaccgtcggcaagcgcctgctgatcaaccaccaccag
cgccgcagcctggaacgcgcctacctggacgccctggccagcctgccggaggcgcaagcg
ccttcgcccgaacagcgctggctgctgctggaaaccctgcaggcgctggacgaactgctc
gacggcctgccgctggcggtgcgccgcgccttcctctggtcgcagctcgaaggcctcgac
tacgccagcatcgccctgcgcctggaggtatccgaacgcacggtaaagcgctacatggcc
aaggcctacgagcactgcctgctggtggacctgtga
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