KEGG   Pseudomonas solani PSBB082: ACSC9U_23695
Entry
ACSC9U_23695      CDS       T11792                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
psob  Pseudomonas solani PSBB082
Pathway
psob02020  Two-component system
Brite
KEGG Orthology (KO) [BR:psob00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ACSC9U_23695
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:psob02022]
    ACSC9U_23695
Two-component system [BR:psob02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   ACSC9U_23695
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_lid_14 AAA_5 AAA_2 HTH_50 FleQ HTH_8 AAA HTH_24 AAA_16 HTH_43
Other DBs
NCBI-ProteinID: XXL42160
LinkDB
Position
5197905..5199281
AA seq 458 aa
MTQPIEAGIQVLLVDDDPHLRQALSQTLDLAGLKVLTLGDANGLAARLPADWPGVVVSDI
RMPGVDGLELLRQLHERDAQLPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASEDLIDSV
RRALDLRRLVLENRSLRLALSDRQQLSGRLVGQSPAAQRLREQIGALAGTSADVLILGET
GAGKEVVARALHDLSARRDGPFVAINAGALAESVVESELFGHEQGAFTGAQKRRIGKFEY
ANGGTVFLDEIESMSPDVQVKLLRLLQERVVERLGANQLIPLDIRVIAATKEDLRQAADQ
GRFRADLYYRLNVASLRIPPLRERGEDILLLFQHFAEAAATRHGSPQRTLDSSQRALLLT
HDWPGNVRELQNAGERFALGLDLALDNGTPDLPASNGGGLSEQVEAFERALILAELGNPH
NSMRSLAEALGLPRKTLSDKLRKHNISFGGGNPAEEQD
NT seq 1377 nt   +upstreamnt  +downstreamnt
atgacccagcccatcgaagccggcatccaggtcctgctggtcgacgacgacccgcacctg
cgccaggccctgagccagacactcgacctcgccggcctcaaggtcctcaccctgggcgat
gccaatggcctggccgcccgcctgcccgccgactggccaggtgtggtggtcagcgatatc
cgcatgcccggcgtcgacggcctcgagctgctgcgccagctccacgagcgcgacgcccag
ttgcccgtactgctgatcaccggccacggcgacgtccccctggcggtgcaggccatgcgc
gccggtgcctacgacttcctggaaaaacccttcgccagcgaagacctgatcgacagcgtg
cgccgcgccctcgacctgcgccgcctggtgctggagaaccgcagcctgcgcctggccctt
tccgatcgccagcagctcagcggccgcctggtgggccaatcgccggcagctcagcgcctg
cgcgaacagatcggcgccctcgccggcaccagcgccgatgtactgatcctcggtgagacc
ggcgccggcaaggaagtggtcgcccgcgccctgcacgacctctccgcgcgccgcgacggc
cccttcgtcgccatcaatgccggtgccctggcggagtcggtggtggaaagcgagctgttc
ggccatgagcagggcgccttcaccggcgcgcagaagcgccgcatcggcaagttcgaatac
gccaacggcggcaccgtgttcctcgacgagatcgagagcatgagcccggacgtacaggtc
aagctgctgcgcctgctgcaggagcgggtggtcgagcgcctcggcgccaaccagttgatc
cccctcgacatccgcgtcatcgccgccaccaaggaagacctgcgccaggccgccgaccag
ggccgcttccgcgccgacctttactaccggctcaacgtcgccagcctgcgcatcccgccg
ctgcgcgaacgcggcgaagacatcctcctgctgttccagcacttcgccgaagcggcggcc
acccgtcacggcagcccgcaacgtacgctggacagctcccagcgcgccctgctgctgacc
cacgattggccaggcaacgtccgtgaactgcagaacgccggggagcgcttcgccctgggc
ctcgacctggcgctggacaacggcacgccagacctgcccgccagcaacggcggcggcctg
agtgagcaggtggaagccttcgagcgggcgctgatcctggccgagctgggcaacccgcac
aattcgatgcgcagcctggccgaagccctgggcctgccgcgcaagacgctctcggacaag
ctgcgcaagcacaacatcagctttggcggcggaaatcccgcagaagaacaggactga

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